Detailed information NTG0422041

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: GAU34_RS11475
• Genome accession: NZ_CP048643
• Coordinates: 2309730..2310200 (-)
• Length: 156 a.a.
• NCBI ID: WP_000934770.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain SR153
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2304730..2315200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAU34_RS11415 (GAU34_11415)	-	2305006..2305206 (-)	201	WP_000265039.1	DUF1514 family protein	-
GAU34_RS11420 (GAU34_11420)	-	2305206..2305355 (-)	150	WP_000595265.1	transcriptional activator RinB	-
GAU34_RS11425 (GAU34_11425)	-	2305352..2305558 (-)	207	WP_000195820.1	DUF1381 domain-containing protein	-
GAU34_RS11430 (GAU34_11430)	-	2305595..2306131 (-)	537	WP_001066444.1	dUTPase	-
GAU34_RS11435 (GAU34_11435)	-	2306124..2306534 (-)	411	WP_138273640.1	acetyltransferase	-
GAU34_RS11440 (GAU34_11440)	-	2306531..2307040 (-)	510	WP_001105598.1	hypothetical protein	-
GAU34_RS11445 (GAU34_11445)	-	2307037..2307486 (-)	450	WP_000982711.1	YopX family protein	-
GAU34_RS11450 (GAU34_11450)	-	2307551..2307793 (-)	243	WP_000131366.1	SAV1978 family virulence-associated passenger protein	-
GAU34_RS11455 (GAU34_11455)	-	2307797..2308165 (-)	369	WP_000101274.1	SA1788 family PVL leukocidin-associated protein	-
GAU34_RS11460 (GAU34_11460)	-	2308178..2308582 (-)	405	WP_000401964.1	RusA family crossover junction endodeoxyribonuclease	-
GAU34_RS11465 (GAU34_11465)	-	2308591..2308809 (-)	219	WP_000338528.1	hypothetical protein	-
GAU34_RS11470 (GAU34_11470)	-	2308816..2309700 (-)	885	WP_000148301.1	DnaD domain protein	-
GAU34_RS11475 (GAU34_11475)	ssbA	2309730..2310200 (-)	471	WP_000934770.1	single-stranded DNA-binding protein	Machinery gene
GAU34_RS11480 (GAU34_11480)	-	2310201..2310818 (-)	618	WP_071621397.1	MBL fold metallo-hydrolase	-
GAU34_RS11485 (GAU34_11485)	-	2310899..2311819 (-)	921	WP_000138481.1	recombinase RecT	-
GAU34_RS11490 (GAU34_11490)	-	2311821..2313764 (-)	1944	WP_000700547.1	ATP-binding protein	-
GAU34_RS11495 (GAU34_11495)	-	2313773..2314036 (-)	264	WP_001205732.1	hypothetical protein	-
GAU34_RS11500 (GAU34_11500)	-	2314045..2314305 (-)	261	WP_000291489.1	DUF1108 family protein	-
GAU34_RS11505 (GAU34_11505)	-	2314398..2314559 (-)	162	WP_000066020.1	DUF1270 domain-containing protein	-
GAU34_RS11510 (GAU34_11510)	-	2314556..2314876 (-)	321	WP_001120197.1	DUF771 domain-containing protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17713.63 Da
• Isoelectric Point: 5.2672

>NTDB_id=422041 GAU34_RS11475 WP_000934770.1 2309730..2310200(-) (ssbA) [Staphylococcus aureus strain SR153]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=422041 GAU34_RS11475 WP_000934770.1 2309730..2310200(-) (ssbA) [Staphylococcus aureus strain SR153]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365