Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | G3A48_RS02460 | Genome accession | NZ_CP048621 |
| Coordinates | 572716..573231 (+) | Length | 171 a.a. |
| NCBI ID | WP_004924506.1 | Uniprot ID | A0A140NIZ6 |
| Organism | Providencia stuartii strain MF1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 567716..578231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3A48_RS02435 (G3A48_02435) | - | 567954..568241 (-) | 288 | WP_014656874.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G3A48_RS02440 (G3A48_02440) | - | 568238..568501 (-) | 264 | WP_004924521.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| G3A48_RS02445 (G3A48_02445) | - | 568580..568918 (-) | 339 | WP_104873021.1 | hypothetical protein | - |
| G3A48_RS22335 (G3A48_02450) | - | 569132..569242 (-) | 111 | WP_350244674.1 | transposase domain-containing protein | - |
| G3A48_RS02455 (G3A48_02455) | uvrA | 569492..572326 (-) | 2835 | WP_014656873.1 | excinuclease ABC subunit UvrA | - |
| G3A48_RS02460 (G3A48_02460) | ssb | 572716..573231 (+) | 516 | WP_004924506.1 | single-stranded DNA-binding protein | Machinery gene |
| G3A48_RS02465 (G3A48_02465) | - | 573881..575980 (+) | 2100 | WP_004924500.1 | RecQ family ATP-dependent DNA helicase | - |
| G3A48_RS02470 (G3A48_02470) | - | 575977..577326 (+) | 1350 | WP_104873020.1 | DNA-processing protein DprA | - |
| G3A48_RS02475 (G3A48_02475) | aarP | 577817..578224 (-) | 408 | WP_004924490.1 | HTH-type transcriptional activator AarP | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18371.35 Da Isoelectric Point: 4.9567
>NTDB_id=421880 G3A48_RS02460 WP_004924506.1 572716..573231(+) (ssb) [Providencia stuartii strain MF1]
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=421880 G3A48_RS02460 WP_004924506.1 572716..573231(+) (ssb) [Providencia stuartii strain MF1]
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGTGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGTGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCGCCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGTGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGTGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCGCCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
70.33 |
100 |
0.749 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.614 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
47.514 |
100 |
0.503 |