Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | G0Q07_RS15065 | Genome accession | NZ_CP048409 |
| Coordinates | 3729867..3730316 (+) | Length | 149 a.a. |
| NCBI ID | WP_163347639.1 | Uniprot ID | A0A6C0RE51 |
| Organism | Draconibacterium halophilum strain M1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3724867..3735316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0Q07_RS15045 (G0Q07_15070) | - | 3725421..3726500 (-) | 1080 | WP_163347632.1 | helix-turn-helix transcriptional regulator | - |
| G0Q07_RS15050 (G0Q07_15075) | - | 3726561..3728111 (-) | 1551 | WP_163347635.1 | Rne/Rng family ribonuclease | - |
| G0Q07_RS15055 (G0Q07_15080) | - | 3728326..3728613 (-) | 288 | WP_163323374.1 | HU family DNA-binding protein | - |
| G0Q07_RS15060 (G0Q07_15085) | mutY | 3728751..3729803 (+) | 1053 | WP_163347637.1 | A/G-specific adenine glycosylase | - |
| G0Q07_RS15065 (G0Q07_15090) | ssb | 3729867..3730316 (+) | 450 | WP_163347639.1 | single-stranded DNA-binding protein | Machinery gene |
| G0Q07_RS15070 (G0Q07_15095) | gldE | 3730332..3731654 (+) | 1323 | WP_163347641.1 | gliding motility-associated protein GldE | - |
| G0Q07_RS15075 (G0Q07_15100) | gldD | 3731677..3732258 (+) | 582 | WP_163347643.1 | gliding motility lipoprotein GldD | - |
| G0Q07_RS15080 (G0Q07_15105) | - | 3732258..3732893 (+) | 636 | WP_163347645.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| G0Q07_RS15085 (G0Q07_15110) | zwf | 3732903..3734396 (+) | 1494 | WP_163347647.1 | glucose-6-phosphate dehydrogenase | - |
| G0Q07_RS15090 (G0Q07_15115) | pgl | 3734444..3735175 (+) | 732 | WP_163347649.1 | 6-phosphogluconolactonase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16470.09 Da Isoelectric Point: 4.6098
>NTDB_id=421135 G0Q07_RS15065 WP_163347639.1 3729867..3730316(+) (ssb) [Draconibacterium halophilum strain M1]
MSVNKVILVGNVGKDPEVRHLDSGVAVANFPLATSESYNSKSGERVTTTEWHNIVLWRGLAEVAEKYVTKGRQLYIEGRI
RTRSYDDKDGNKRYITEIYGDQMTMLGTRADNQGSSEQGGATQNSGSKSTPQVSEPDIEEPEGDEDLPF
MSVNKVILVGNVGKDPEVRHLDSGVAVANFPLATSESYNSKSGERVTTTEWHNIVLWRGLAEVAEKYVTKGRQLYIEGRI
RTRSYDDKDGNKRYITEIYGDQMTMLGTRADNQGSSEQGGATQNSGSKSTPQVSEPDIEEPEGDEDLPF
Nucleotide
Download Length: 450 bp
>NTDB_id=421135 G0Q07_RS15065 WP_163347639.1 3729867..3730316(+) (ssb) [Draconibacterium halophilum strain M1]
ATGTCAGTAAATAAAGTAATTCTTGTTGGAAACGTAGGAAAAGACCCTGAAGTACGTCACCTTGATTCGGGTGTTGCAGT
AGCTAACTTCCCTTTGGCAACATCAGAAAGTTATAATTCAAAAAGTGGTGAACGCGTTACCACTACCGAGTGGCACAATA
TTGTATTGTGGAGAGGATTAGCAGAAGTGGCTGAAAAATACGTAACCAAAGGACGTCAGTTGTATATAGAGGGAAGAATA
AGAACCCGCTCGTACGACGACAAAGACGGCAACAAACGCTACATTACTGAGATTTATGGCGATCAGATGACAATGCTCGG
CACCCGTGCTGACAACCAGGGTTCATCAGAACAAGGGGGAGCCACCCAAAACTCTGGCTCTAAATCCACTCCGCAGGTTT
CCGAACCTGATATTGAAGAACCGGAGGGAGACGAAGATCTTCCTTTCTAA
ATGTCAGTAAATAAAGTAATTCTTGTTGGAAACGTAGGAAAAGACCCTGAAGTACGTCACCTTGATTCGGGTGTTGCAGT
AGCTAACTTCCCTTTGGCAACATCAGAAAGTTATAATTCAAAAAGTGGTGAACGCGTTACCACTACCGAGTGGCACAATA
TTGTATTGTGGAGAGGATTAGCAGAAGTGGCTGAAAAATACGTAACCAAAGGACGTCAGTTGTATATAGAGGGAAGAATA
AGAACCCGCTCGTACGACGACAAAGACGGCAACAAACGCTACATTACTGAGATTTATGGCGATCAGATGACAATGCTCGG
CACCCGTGCTGACAACCAGGGTTCATCAGAACAAGGGGGAGCCACCCAAAACTCTGGCTCTAAATCCACTCCGCAGGTTT
CCGAACCTGATATTGAAGAACCGGAGGGAGACGAAGATCTTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
45.349 |
100 |
0.523 |
| ssb | Glaesserella parasuis strain SC1401 |
41.243 |
100 |
0.49 |
| ssb | Neisseria meningitidis MC58 |
45.033 |
100 |
0.456 |
| ssb | Neisseria gonorrhoeae MS11 |
44.371 |
100 |
0.45 |