Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GZS04_RS09205 | Genome accession | NZ_CP048382 |
| Coordinates | 1920323..1920847 (+) | Length | 174 a.a. |
| NCBI ID | WP_003826621.1 | Uniprot ID | A0A5B0T4S2 |
| Organism | Citrobacter freundii strain 62 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1915323..1925847
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS04_RS09190 (GZS04_09190) | aphA | 1915936..1916649 (+) | 714 | WP_003826615.1 | acid phosphatase AphA | - |
| GZS04_RS09195 (GZS04_09195) | - | 1916777..1917133 (+) | 357 | WP_003031719.1 | MmcQ/YjbR family DNA-binding protein | - |
| GZS04_RS09200 (GZS04_09200) | uvrA | 1917249..1920071 (-) | 2823 | WP_003031720.1 | excinuclease ABC subunit UvrA | - |
| GZS04_RS09205 (GZS04_09205) | ssb | 1920323..1920847 (+) | 525 | WP_003826621.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| GZS04_RS09210 (GZS04_09210) | - | 1921329..1923638 (+) | 2310 | WP_128295865.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| GZS04_RS09215 (GZS04_09215) | - | 1923722..1924003 (-) | 282 | WP_003031727.1 | YjcB family protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18621.66 Da Isoelectric Point: 5.2456
>NTDB_id=420891 GZS04_RS09205 WP_003826621.1 1920323..1920847(+) (ssb) [Citrobacter freundii strain 62]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=420891 GZS04_RS09205 WP_003826621.1 1920323..1920847(+) (ssb) [Citrobacter freundii strain 62]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGTGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGTAGAAAAGTACACCACTGAGGTTGTTGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGCGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCTCCGGCAGCGCCG
TCTAACGAACCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGTGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGTAGAAAAGTACACCACTGAGGTTGTTGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGCGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCCGCTCCGGCAGCGCCG
TCTAACGAACCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.889 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
56.831 |
100 |
0.598 |
| ssb | Neisseria meningitidis MC58 |
48.603 |
100 |
0.5 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.5 |