Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | EBO27_RS02120 | Genome accession | NZ_CP061034 |
| Coordinates | 455051..455416 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PA3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 450051..460416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EBO27_RS02090 (EBO27_02090) | pyrR | 450674..451186 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| EBO27_RS02095 (EBO27_02095) | ruvX | 451298..451732 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| EBO27_RS02100 (EBO27_02100) | - | 451732..452301 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| EBO27_RS02105 (EBO27_02105) | - | 452350..453243 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| EBO27_RS02110 (EBO27_02110) | gshB | 453390..454343 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| EBO27_RS02115 (EBO27_02115) | pilG | 454597..455004 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| EBO27_RS02120 (EBO27_02120) | pilH | 455051..455416 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| EBO27_RS02125 (EBO27_02125) | - | 455467..456003 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| EBO27_RS02130 (EBO27_02130) | pilJ | 456088..458136 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| EBO27_RS02135 (EBO27_02135) | pilK | 458197..459072 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=419639 EBO27_RS02120 WP_003084587.1 455051..455416(+) (pilH) [Pseudomonas aeruginosa strain PA3]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=419639 EBO27_RS02120 WP_003084587.1 455051..455416(+) (pilH) [Pseudomonas aeruginosa strain PA3]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |