Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GWK91_RS09595 Genome accession   NZ_CP048021
Coordinates   1873398..1874351 (-) Length   317 a.a.
NCBI ID   WP_044163179.1    Uniprot ID   A0A6B9YEL3
Organism   Virgibacillus sp. MSP4-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1868398..1879351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWK91_RS09570 (GWK91_09565) - 1868542..1869525 (-) 984 WP_044163189.1 acyltransferase family protein -
  GWK91_RS09575 (GWK91_09570) - 1869826..1870509 (-) 684 WP_044163187.1 SurA N-terminal domain-containing protein -
  GWK91_RS09580 (GWK91_09575) - 1870742..1871680 (-) 939 WP_044163185.1 siderophore ABC transporter substrate-binding protein -
  GWK91_RS09585 (GWK91_09580) - 1871706..1872464 (-) 759 WP_044163184.1 ABC transporter ATP-binding protein -
  GWK91_RS09590 (GWK91_09585) - 1872458..1873408 (-) 951 WP_044163181.1 iron chelate uptake ABC transporter family permease subunit -
  GWK91_RS09595 (GWK91_09590) ceuB 1873398..1874351 (-) 954 WP_044163179.1 ABC transporter permease Machinery gene
  GWK91_RS09600 (GWK91_09595) - 1874750..1876111 (-) 1362 WP_044163177.1 GntP family permease -
  GWK91_RS09605 (GWK91_09600) - 1876298..1877440 (+) 1143 WP_044163176.1 conserved virulence factor C family protein -
  GWK91_RS09610 (GWK91_09605) - 1877556..1878632 (-) 1077 WP_044163175.1 nitronate monooxygenase family protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35012.25 Da        Isoelectric Point: 10.1339

>NTDB_id=419503 GWK91_RS09595 WP_044163179.1 1873398..1874351(-) (ceuB) [Virgibacillus sp. MSP4-1]
MKKRYLLIVLLILSVISLFIGVSDISPSDLLNLQSEEVQILYVSRVPRLISIIIAGMSMSVAGLIMMQLTRNRFVSPTTA
GTMDSARFGILVSLMVFTSASPLQKMLVAFVFALLGTFIFMKILDQVKFKDTIFIPLVGLMFGNIVNSLSTFFAYKNNLI
QNMSSWLQGDFSLIIQGRYELLFLSIPLLILAYFFANRFTIAGMGEEFAKNLGLNYRQVVNIGLAIVAMVSAVVVLTVGM
IPFLGLVIPNIVTIFRGDHLKNNLPHTAMLGAIFVLACDILSRVIIYPYEIAIGLTVGVVGSAIFVYLLVRRKAYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=419503 GWK91_RS09595 WP_044163179.1 1873398..1874351(-) (ceuB) [Virgibacillus sp. MSP4-1]
ATGAAGAAGAGATATTTACTCATTGTACTTCTGATTCTTTCCGTAATATCACTGTTTATCGGTGTATCGGATATCTCACC
ATCTGATTTATTGAACCTGCAAAGTGAAGAGGTACAAATCTTATATGTAAGCAGGGTGCCACGCTTAATTAGCATTATTA
TTGCAGGGATGAGCATGAGTGTCGCCGGTTTAATTATGATGCAGCTTACAAGAAACCGGTTCGTATCGCCCACAACAGCA
GGTACGATGGATTCTGCCCGGTTTGGGATACTGGTATCGCTGATGGTCTTCACCTCAGCTAGTCCCTTACAAAAGATGCT
TGTTGCTTTTGTCTTTGCTTTACTGGGGACCTTTATCTTTATGAAAATCCTTGACCAGGTGAAATTCAAGGATACGATAT
TCATCCCGCTTGTAGGCTTAATGTTCGGGAATATTGTGAATTCATTATCGACCTTTTTTGCTTACAAAAATAATCTGATC
CAAAACATGTCGTCCTGGCTTCAGGGAGATTTTTCGTTAATTATTCAGGGGCGTTATGAATTGTTATTTCTCAGCATCCC
GTTGCTGATTCTGGCTTACTTTTTTGCCAACCGTTTTACCATTGCCGGAATGGGAGAGGAATTCGCAAAAAACTTAGGCC
TGAATTACCGTCAGGTCGTAAATATCGGCTTAGCCATAGTTGCGATGGTAAGTGCTGTTGTTGTTTTAACCGTAGGAATG
ATTCCTTTCCTCGGGCTGGTCATCCCGAATATCGTTACCATTTTTCGAGGAGATCATTTAAAAAACAATCTGCCGCACAC
AGCGATGCTTGGGGCCATATTTGTCCTTGCATGTGACATTTTAAGCAGAGTCATTATTTATCCTTATGAAATTGCTATAG
GACTTACAGTAGGTGTTGTTGGAAGTGCAATATTTGTTTATTTACTAGTTAGGAGAAAGGCATATGGGTTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B9YEL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.674

98.738

0.53

Multiple sequence alignment