Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GU926_RS10150 | Genome accession | NZ_CP047897 |
| Coordinates | 2421304..2421783 (+) | Length | 159 a.a. |
| NCBI ID | WP_160691486.1 | Uniprot ID | A0A6P1NXM9 |
| Organism | Nibribacter ruber strain BT10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2416304..2426783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GU926_RS10130 (GU926_10130) | - | 2416899..2418503 (-) | 1605 | WP_160691480.1 | Rne/Rng family ribonuclease | - |
| GU926_RS10135 (GU926_10135) | - | 2418728..2419624 (-) | 897 | WP_160691482.1 | tetratricopeptide repeat protein | - |
| GU926_RS10140 (GU926_10140) | - | 2419686..2419991 (-) | 306 | WP_066506288.1 | HU family DNA-binding protein | - |
| GU926_RS10145 (GU926_10145) | mutY | 2420178..2421254 (+) | 1077 | WP_160691484.1 | A/G-specific adenine glycosylase | - |
| GU926_RS10150 (GU926_10150) | ssb | 2421304..2421783 (+) | 480 | WP_160691486.1 | single-stranded DNA-binding protein | Machinery gene |
| GU926_RS10155 (GU926_10155) | - | 2421908..2423173 (+) | 1266 | WP_232058291.1 | transporter associated domain-containing protein | - |
| GU926_RS10160 (GU926_10160) | gldD | 2423160..2423762 (+) | 603 | WP_160691488.1 | gliding motility lipoprotein GldD | - |
| GU926_RS10165 (GU926_10165) | - | 2424092..2424601 (+) | 510 | WP_160691490.1 | hypothetical protein | - |
| GU926_RS10170 (GU926_10170) | - | 2424765..2425685 (+) | 921 | WP_160691492.1 | M28 family peptidase | - |
| GU926_RS10175 (GU926_10175) | - | 2425718..2426245 (+) | 528 | WP_160691493.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 17222.88 Da Isoelectric Point: 5.3052
>NTDB_id=418377 GU926_RS10150 WP_160691486.1 2421304..2421783(+) (ssb) [Nibribacter ruber strain BT10]
MASINKVILIGNLGKDPEVRHLEGGVAVARFPLATSETFKDKNGERQERTEWHNIVVWRGLAEVTEKYLKKGQSVYIEGK
IRTNSYQDKEGVQRYSTEIVADNMTMLGGRSEGGSGNGNGSSYEQSNSSANAPASSASTSSKGNTSSFSAEQEPDDLPF
MASINKVILIGNLGKDPEVRHLEGGVAVARFPLATSETFKDKNGERQERTEWHNIVVWRGLAEVTEKYLKKGQSVYIEGK
IRTNSYQDKEGVQRYSTEIVADNMTMLGGRSEGGSGNGNGSSYEQSNSSANAPASSASTSSKGNTSSFSAEQEPDDLPF
Nucleotide
Download Length: 480 bp
>NTDB_id=418377 GU926_RS10150 WP_160691486.1 2421304..2421783(+) (ssb) [Nibribacter ruber strain BT10]
ATGGCAAGCATTAACAAAGTAATTTTAATAGGAAACCTGGGCAAAGACCCAGAGGTGCGTCACTTAGAAGGCGGCGTGGC
CGTGGCCCGTTTCCCGTTGGCTACTTCTGAGACGTTCAAAGACAAAAACGGCGAGCGCCAGGAGCGCACCGAGTGGCACA
ACATTGTGGTTTGGCGCGGTCTAGCCGAGGTAACGGAGAAGTACCTGAAGAAAGGCCAGTCTGTCTACATTGAAGGCAAG
ATCAGAACCAACAGCTACCAGGACAAAGAAGGCGTGCAACGCTACAGCACAGAGATTGTGGCAGACAACATGACCATGTT
GGGCGGCCGCTCTGAAGGCGGTTCTGGTAACGGCAACGGCAGCAGCTATGAGCAAAGCAACAGCAGCGCCAACGCCCCGG
CCAGCAGTGCCTCCACTTCTTCTAAAGGAAATACGTCTTCTTTCTCTGCAGAACAGGAGCCCGACGACCTTCCTTTCTAA
ATGGCAAGCATTAACAAAGTAATTTTAATAGGAAACCTGGGCAAAGACCCAGAGGTGCGTCACTTAGAAGGCGGCGTGGC
CGTGGCCCGTTTCCCGTTGGCTACTTCTGAGACGTTCAAAGACAAAAACGGCGAGCGCCAGGAGCGCACCGAGTGGCACA
ACATTGTGGTTTGGCGCGGTCTAGCCGAGGTAACGGAGAAGTACCTGAAGAAAGGCCAGTCTGTCTACATTGAAGGCAAG
ATCAGAACCAACAGCTACCAGGACAAAGAAGGCGTGCAACGCTACAGCACAGAGATTGTGGCAGACAACATGACCATGTT
GGGCGGCCGCTCTGAAGGCGGTTCTGGTAACGGCAACGGCAGCAGCTATGAGCAAAGCAACAGCAGCGCCAACGCCCCGG
CCAGCAGTGCCTCCACTTCTTCTAAAGGAAATACGTCTTCTTTCTCTGCAGAACAGGAGCCCGACGACCTTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria meningitidis MC58 |
45.665 |
100 |
0.497 |
| ssb | Vibrio cholerae strain A1552 |
44.633 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
44.509 |
100 |
0.484 |
| ssb | Glaesserella parasuis strain SC1401 |
42.778 |
100 |
0.484 |