Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   M594_RS08570 Genome accession   NZ_CP047883
Coordinates   1786303..1788264 (-) Length   653 a.a.
NCBI ID   WP_173876575.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V3-A4     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1781303..1793264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS08550 (M594_08590) - 1782535..1783218 (-) 684 WP_125446895.1 tyrosine-protein kinase -
  M594_RS08555 (M594_08595) cpsC 1783228..1783920 (-) 693 WP_173876572.1 capsular polysaccharide biosynthesis protein CpsC -
  M594_RS08560 (M594_08600) cps4B 1783929..1784660 (-) 732 WP_173876573.1 capsular polysaccharide biosynthesis protein Cps4B -
  M594_RS08565 (M594_08605) - 1784662..1786107 (-) 1446 WP_173876574.1 LCP family protein -
  M594_RS08570 (M594_08610) amiA3 1786303..1788264 (-) 1962 WP_173876575.1 peptide ABC transporter substrate-binding protein Regulator
  M594_RS08575 (M594_08615) amiA 1788411..1790378 (-) 1968 WP_173876576.1 peptide ABC transporter substrate-binding protein Regulator
  M594_RS08580 (M594_08620) - 1790546..1792156 (-) 1611 WP_173876577.1 glycoside hydrolase family 13 protein -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73228.61 Da        Isoelectric Point: 4.9316

>NTDB_id=418273 M594_RS08570 WP_173876575.1 1786303..1788264(-) (amiA3) [Streptococcus mitis strain S022-V3-A4]
MMTMKKRLIGTGLVLATGILLSACGQSNTDTKTYSSTFSGNPTTFNYLLDYYADNTSIITNLVDGLLENDSYGNLTPALA
EDWSVSADGLTYTYKLRKDAKWYTADGEEYAPVKAQDFVTGIKYASDNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKEKEFGTLTPSSILYNGPYLLKGFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSLAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKAYNHTAKTTD
EQKKSTQIAILNKNFRQALNFAIDRTAYSAQSNGQEAASKTLRNTLVPPTFVQVGDKSFGDVVSSKLVQYGTEWSGINLA
DAQDGYFNKEKAQAKFAESKKELESKGVTFPIHIDVPVDQTNKNAVSGMNSVKQTLETVFGDDNIVVDVQQLSTDDFSNV
AFLAPNPASRDYDLNFDGWVGDYQDPSTYLDPFNAEDGFYLKIFGLDAKEDQELIKSLGLDTYTKLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLIMSTMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMKLQKDPVTKKQFDEAKAKWEEESKKA
IEKSQKEFESHIK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=418273 M594_RS08570 WP_173876575.1 1786303..1788264(-) (amiA3) [Streptococcus mitis strain S022-V3-A4]
GTGATGACAATGAAAAAAAGACTCATCGGAACTGGTCTTGTCCTAGCTACAGGGATTTTACTCTCAGCTTGTGGGCAATC
TAACACAGATACAAAGACGTATTCGTCAACTTTTAGTGGAAATCCAACAACTTTTAATTATCTTTTGGATTATTATGCAG
ATAATACATCTATAATTACTAATCTTGTGGATGGTTTGCTAGAAAATGATAGCTATGGGAATCTAACGCCAGCTCTGGCT
GAAGATTGGTCAGTTTCAGCGGATGGTTTAACCTATACCTATAAACTCAGAAAAGATGCCAAGTGGTATACAGCTGATGG
AGAAGAATATGCTCCAGTAAAAGCACAGGACTTTGTTACTGGGATCAAATATGCTTCGGATAACAAGGGGCAAGCGATGG
ATCTCATTCAAAATTCAATCAAGGGATTGAATGACTATGTGACTGGTGTGACAAATGATTTCTCTACTGTTGGTGTCAAA
GCCTTGGATGACTATACGGTTGAGTACACTTTGACAAGACCAGAGCCTTATTGGAATTCTAAGACGACTAACAGTATTCT
CTTCCCAGTCAATGAAGAGTTTTTGAAGTCAAAGGAAAAAGAATTTGGTACCTTGACGCCAAGTAGTATCCTTTACAACG
GACCTTACTTGTTAAAAGGTTTTACATCAAAATCTTCGATCGAGTATGTGAAGAATCCACACTATTATGATCATGATAAA
GTAACCATTGAAAAAGTTAAACTGGCTTATTTTGATGGTTCTGATCAAGAGATGACTATTCGAAATTTTGAAAGTGGGGC
CTATTCTCTGGCAGGAGTTTATCCAAACAGCTCTAACTATGCCAAGACAAAAGAAAAATATCAAGACAATATTGTTTATA
GCTTACAAGACAAGACATCTTGGTACTTTAACTTTAATGTTAACCGTAAAGCTTATAACCATACAGCTAAAACAACAGAT
GAACAAAAGAAATCAACTCAAATAGCAATTTTAAATAAGAACTTCCGTCAAGCGTTGAACTTTGCCATCGATCGTACGGC
TTATTCTGCCCAATCTAATGGTCAAGAAGCAGCAAGCAAGACCCTTCGTAACACCCTTGTTCCTCCTACTTTTGTACAAG
TGGGAGATAAGAGTTTCGGAGATGTGGTGTCTTCTAAACTTGTTCAGTACGGAACAGAATGGTCAGGCATTAACTTGGCG
GATGCCCAAGACGGATACTTCAATAAGGAAAAGGCCCAAGCAAAATTTGCGGAATCTAAAAAGGAATTGGAATCAAAAGG
GGTGACCTTCCCTATTCATATTGATGTTCCTGTTGATCAAACCAATAAAAACGCGGTTTCTGGTATGAATTCGGTTAAAC
AGACCTTAGAGACCGTATTTGGGGATGACAATATTGTGGTTGATGTGCAACAATTATCTACGGATGATTTCAGCAATGTT
GCATTTCTTGCTCCGAATCCGGCGTCTCGTGATTACGACTTGAACTTTGATGGTTGGGTGGGTGATTACCAAGATCCGTC
AACTTATCTTGATCCATTTAATGCAGAAGATGGTTTCTATCTCAAGATTTTTGGTTTGGATGCTAAGGAAGATCAAGAAC
TGATTAAGAGTTTAGGTCTCGATACTTATACGAAACTTTTAAAAGAGGCAGATGCGGAAAACAAAGATGTTGCTAAGCGT
TATGAAAAATATGCTGAAGCACAAGCTTGGATGATTGATAATTCTCTAATCATGTCTACGATGTCAAATGGTGGTACAGC
CTCTGTCACCAAAGTAACTCCATTTACACGTGCTTACTCTCTAGTGGGTATCAAAGGTGATGGAAATAACTACAAGTACA
TGAAACTTCAAAAAGACCCTGTTACCAAGAAACAATTTGATGAAGCTAAGGCTAAGTGGGAAGAAGAAAGTAAGAAGGCT
ATTGAAAAAAGCCAAAAAGAATTTGAAAGTCATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.769

99.541

0.505
  amiA3 Streptococcus thermophilus LMG 18311

50.615

99.541

0.504
  amiA Streptococcus salivarius strain HSISS4

49.695

100

0.499

Multiple sequence alignment