Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | E3S64_RS14210 | Genome accession | NZ_CP047861 |
| Coordinates | 2847987..2848457 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain UP_1322 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2823622..2853503 | 2847987..2848457 | within | 0 |
Gene organization within MGE regions
Location: 2823622..2853503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S64_RS14050 (E3S64_14050) | - | 2823622..2824248 (-) | 627 | WP_000522381.1 | nitroreductase family protein | - |
| E3S64_RS14055 (E3S64_14055) | - | 2824445..2825704 (+) | 1260 | WP_000120297.1 | SdrH family protein | - |
| E3S64_RS14060 (E3S64_14060) | mroQ | 2825729..2826472 (-) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| E3S64_RS14065 (E3S64_14065) | groES | 2826647..2826931 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| E3S64_RS14070 (E3S64_14070) | groL | 2827007..2828623 (+) | 1617 | WP_000240655.1 | chaperonin GroEL | - |
| E3S64_RS14075 (E3S64_14075) | - | 2829163..2830470 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| E3S64_RS14080 (E3S64_14080) | - | 2830914..2832137 (-) | 1224 | WP_160199676.1 | ArgE/DapE family deacylase | - |
| E3S64_RS14085 (E3S64_14085) | lukH | 2832573..2833628 (+) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| E3S64_RS14090 (E3S64_14090) | lukG | 2833650..2834666 (+) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| E3S64_RS14095 (E3S64_14095) | sph | 2834904..2835728 (-) | 825 | Protein_2740 | sphingomyelin phosphodiesterase | - |
| E3S64_RS14100 (E3S64_14100) | - | 2835785..2836822 (-) | 1038 | WP_000857180.1 | tyrosine-type recombinase/integrase | - |
| E3S64_RS14105 (E3S64_14105) | - | 2836885..2837127 (-) | 243 | WP_000427213.1 | hypothetical protein | - |
| E3S64_RS14110 (E3S64_14110) | - | 2837138..2838121 (-) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| E3S64_RS14115 (E3S64_14115) | - | 2838221..2838403 (-) | 183 | WP_000694772.1 | hypothetical protein | - |
| E3S64_RS14120 (E3S64_14120) | - | 2838607..2838948 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| E3S64_RS14125 (E3S64_14125) | - | 2838954..2839886 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| E3S64_RS14130 (E3S64_14130) | - | 2839902..2840615 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| E3S64_RS14135 (E3S64_14135) | - | 2840578..2840752 (+) | 175 | Protein_2748 | transcriptional regulator | - |
| E3S64_RS14140 (E3S64_14140) | - | 2840749..2841012 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| E3S64_RS14145 (E3S64_14145) | - | 2841028..2841243 (+) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| E3S64_RS14150 (E3S64_14150) | - | 2841232..2841561 (-) | 330 | WP_000128909.1 | hypothetical protein | - |
| E3S64_RS14155 (E3S64_14155) | - | 2841612..2842364 (+) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| E3S64_RS14160 (E3S64_14160) | - | 2842380..2842577 (+) | 198 | WP_001148856.1 | hypothetical protein | - |
| E3S64_RS14165 (E3S64_14165) | - | 2842564..2842944 (-) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| E3S64_RS14170 (E3S64_14170) | - | 2842999..2843322 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| E3S64_RS14175 (E3S64_14175) | - | 2843319..2843480 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| E3S64_RS14180 (E3S64_14180) | - | 2843575..2843877 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| E3S64_RS14185 (E3S64_14185) | - | 2843882..2844142 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| E3S64_RS14190 (E3S64_14190) | - | 2844151..2844414 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| E3S64_RS14195 (E3S64_14195) | - | 2844423..2846366 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| E3S64_RS14200 (E3S64_14200) | - | 2846368..2847288 (+) | 921 | WP_000180600.1 | recombinase RecT | - |
| E3S64_RS14205 (E3S64_14205) | - | 2847369..2847986 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| E3S64_RS14210 (E3S64_14210) | ssbA | 2847987..2848457 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S64_RS14215 (E3S64_14215) | - | 2848487..2849380 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| E3S64_RS14220 (E3S64_14220) | - | 2849387..2849605 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| E3S64_RS14225 (E3S64_14225) | - | 2849614..2850018 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3S64_RS14230 (E3S64_14230) | - | 2850031..2850402 (+) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| E3S64_RS14235 (E3S64_14235) | - | 2850402..2850659 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| E3S64_RS14240 (E3S64_14240) | - | 2850662..2850904 (+) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| E3S64_RS14245 (E3S64_14245) | - | 2850919..2851164 (+) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| E3S64_RS14250 (E3S64_14250) | - | 2851161..2851697 (+) | 537 | WP_000185693.1 | dUTPase | - |
| E3S64_RS14255 (E3S64_14255) | - | 2851734..2851979 (+) | 246 | WP_001282077.1 | hypothetical protein | - |
| E3S64_RS14260 (E3S64_14260) | - | 2851976..2852182 (+) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| E3S64_RS14265 (E3S64_14265) | rinB | 2852179..2852328 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| E3S64_RS14270 (E3S64_14270) | - | 2852328..2852528 (+) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| E3S64_RS14275 (E3S64_14275) | - | 2852556..2852972 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| E3S64_RS14280 (E3S64_14280) | - | 2853204..2853503 (+) | 300 | WP_000988332.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=418043 E3S64_RS14210 WP_000934759.1 2847987..2848457(+) (ssbA) [Staphylococcus aureus strain UP_1322]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=418043 E3S64_RS14210 WP_000934759.1 2847987..2848457(+) (ssbA) [Staphylococcus aureus strain UP_1322]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |