Detailed information NTG0041757

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PSTAB_RS17935
• Genome accession: NC_015740
• Coordinates: 3885080..3886417 (+)
• Length: 445 a.a.
• NCBI ID: WP_041772001.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3880080..3891417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAB_RS17910 (PSTAB_3607)	pgeF	3880110..3880847 (-)	738	WP_013984072.1	peptidoglycan editing factor PgeF	-
PSTAB_RS17915 (PSTAB_3608)	rluD	3880844..3881818 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PSTAB_RS17920 (PSTAB_3609)	-	3882023..3883012 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
PSTAB_RS17925 (PSTAB_3610)	-	3883134..3883367 (+)	234	WP_013984074.1	PP0621 family protein	-
PSTAB_RS17930 (PSTAB_3611)	pilS	3883357..3884949 (+)	1593	WP_013984075.1	sensor histidine kinase	Regulator
PSTAB_RS17935 (PSTAB_3612)	pilR	3885080..3886417 (+)	1338	WP_041772001.1	sigma-54-dependent transcriptional regulator	Regulator
PSTAB_RS17940 (PSTAB_3613)	-	3886461..3887519 (-)	1059	WP_011914666.1	DUF2333 family protein	-
PSTAB_RS17945 (PSTAB_3614)	-	3887737..3889332 (+)	1596	WP_013984077.1	response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49540.05 Da
• Isoelectric Point: 6.4140

>NTDB_id=41757 PSTAB_RS17935 WP_041772001.1 3885080..3886417(+) (pilR) [Stutzerimonas stutzeri]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPLKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=41757 PSTAB_RS17935 WP_041772001.1 3885080..3886417(+) (pilR) [Stutzerimonas stutzeri]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGTAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGCGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGATCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCCCCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGCTGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCGAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGTGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCAGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	37.892	100	0.38