Detailed information NTG0041735

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: PSTAB_RS02940
• Genome accession: NC_015740
• Coordinates: 644191..645255 (+)
• Length: 354 a.a.
• NCBI ID: WP_013981650.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 639191..650255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAB_RS02925 (PSTAB_0587)	-	639317..640111 (+)	795	WP_013981648.1	thermonuclease family protein	-
PSTAB_RS02930 (PSTAB_0588)	-	640253..641521 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
PSTAB_RS02935 (PSTAB_0589)	-	641588..644011 (-)	2424	WP_013981649.1	penicillin-binding protein 1A	-
PSTAB_RS02940 (PSTAB_0590)	comM	644191..645255 (+)	1065	WP_013981650.1	pilus assembly protein PilM	Machinery gene
PSTAB_RS02945 (PSTAB_0591)	pilN	645255..645827 (+)	573	WP_013981651.1	type 4a pilus biogenesis protein PilN	-
PSTAB_RS02950 (PSTAB_0592)	pilO	645824..646450 (+)	627	WP_017244292.1	type 4a pilus biogenesis protein PilO	-
PSTAB_RS02955 (PSTAB_0593)	pilP	646447..646974 (+)	528	WP_013981653.1	type 4a pilus biogenesis lipoprotein PilP	-
PSTAB_RS02960 (PSTAB_0594)	pilQ	647028..649148 (+)	2121	WP_013981654.1	type IV pilus secretin PilQ	Machinery gene
PSTAB_RS02965 (PSTAB_0595)	aroK	649152..649697 (+)	546	WP_080564967.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37744.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=41735 PSTAB_RS02940 WP_013981650.1 644191..645255(+) (comM) [Stutzerimonas stutzeri]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTAHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=41735 PSTAB_RS02940 WP_013981650.1 644191..645255(+) (comM) [Stutzerimonas stutzeri]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCACCGAATGCCGTCGTCGAAAAGAATA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAAATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTATGGGTTGCTCGCTTCACAGCTGGG
TACAGCGCACGGCGAGCTGACCGTTGCCGTCGTCGATATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCAGGTCTCGATCACATGATTCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCT
TTCGCCGATATGGCTTTGAGCGGCAAGGTGAACGCCGGGGCGCTGGCCAGCGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463