Detailed information NTG0416767

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: E3S70_RS09200
• Genome accession: NZ_CP047801
• Coordinates: 1808534..1809037 (-)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain UP_248
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1803534..1814037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3S70_RS09155 (E3S70_09155)	-	1803852..1804235 (-)	384	WP_000403837.1	hypothetical protein	-
E3S70_RS09160 (E3S70_09160)	-	1804237..1804440 (-)	204	WP_001231376.1	hypothetical protein	-
E3S70_RS09165 (E3S70_09165)	-	1804407..1804580 (-)	174	WP_000784892.1	hypothetical protein	-
E3S70_RS09170 (E3S70_09170)	-	1804592..1804864 (-)	273	WP_001138305.1	helix-turn-helix domain-containing protein	-
E3S70_RS09175 (E3S70_09175)	-	1804865..1805029 (-)	165	WP_001611932.1	helix-turn-helix domain-containing protein	-
E3S70_RS09180 (E3S70_09180)	-	1805178..1805801 (+)	624	WP_000230361.1	helix-turn-helix domain-containing protein	-
E3S70_RS09185 (E3S70_09185)	-	1805962..1807176 (+)	1215	WP_000270135.1	tyrosine-type recombinase/integrase	-
E3S70_RS09190 (E3S70_09190)	-	1807289..1808008 (+)	720	WP_000400841.1	type II toxin-antitoxin system PemK/MazF family toxin	-
E3S70_RS09195 (E3S70_09195)	rpsR	1808240..1808482 (-)	243	WP_000897044.1	30S ribosomal protein S18	-
E3S70_RS09200 (E3S70_09200)	ssbA	1808534..1809037 (-)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
E3S70_RS09205 (E3S70_09205)	rpsF	1809058..1809354 (-)	297	WP_001261460.1	30S ribosomal protein S6	-
E3S70_RS09210 (E3S70_09210)	-	1809598..1809789 (+)	192	WP_001052483.1	hypothetical protein	-
E3S70_RS09215 (E3S70_09215)	ychF	1809875..1810972 (-)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
E3S70_RS09220 (E3S70_09220)	-	1810984..1811187 (-)	204	WP_000157348.1	DUF951 domain-containing protein	-
E3S70_RS09225 (E3S70_09225)	-	1811217..1812098 (-)	882	WP_000373076.1	mechanosensitive ion channel family protein	-
E3S70_RS09230 (E3S70_09230)	-	1812252..1813097 (-)	846	WP_001573568.1	ParB/RepB/Spo0J family partition protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=416767 E3S70_RS09200 WP_000934799.1 1808534..1809037(-) (ssbA) [Staphylococcus aureus strain UP_248]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=416767 E3S70_RS09200 WP_000934799.1 1808534..1809037(-) (ssbA) [Staphylococcus aureus strain UP_248]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365