Detailed information NTG0416683

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: E3S73_RS08460
• Genome accession: NZ_CP047799
• Coordinates: 1681748..1682251 (-)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain UP_322
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1676748..1687251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3S73_RS08415 (E3S73_08415)	tscT	1676823..1677143 (-)	321	WP_123090134.1	type II toxin-antitoxin system toxin TscT	-
E3S73_RS08420 (E3S73_08420)	tscA	1677146..1677355 (-)	210	WP_001058492.1	type II toxin-antitoxin system antitoxin TscA	-
E3S73_RS08425 (E3S73_08425)	-	1677348..1677494 (-)	147	WP_000784885.1	hypothetical protein	-
E3S73_RS08430 (E3S73_08430)	-	1677506..1677778 (-)	273	WP_053040301.1	helix-turn-helix domain-containing protein	-
E3S73_RS08435 (E3S73_08435)	-	1677779..1677991 (-)	213	WP_053040300.1	helix-turn-helix domain-containing protein	-
E3S73_RS08440 (E3S73_08440)	-	1678141..1678875 (+)	735	WP_000142630.1	helix-turn-helix domain-containing protein	-
E3S73_RS08445 (E3S73_08445)	-	1679174..1680388 (+)	1215	WP_123090135.1	tyrosine-type recombinase/integrase	-
E3S73_RS08450 (E3S73_08450)	-	1680389..1681222 (+)	834	WP_180372434.1	type II toxin-antitoxin system PemK/MazF family toxin	-
E3S73_RS08455 (E3S73_08455)	rpsR	1681454..1681696 (-)	243	WP_000897044.1	30S ribosomal protein S18	-
E3S73_RS08460 (E3S73_08460)	ssbA	1681748..1682251 (-)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
E3S73_RS08465 (E3S73_08465)	rpsF	1682272..1682568 (-)	297	WP_001261460.1	30S ribosomal protein S6	-
E3S73_RS08470 (E3S73_08470)	-	1682812..1683003 (+)	192	WP_001052483.1	hypothetical protein	-
E3S73_RS08475 (E3S73_08475)	ychF	1683089..1684186 (-)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
E3S73_RS08480 (E3S73_08480)	-	1684198..1684401 (-)	204	WP_000157348.1	DUF951 domain-containing protein	-
E3S73_RS08485 (E3S73_08485)	-	1684431..1685312 (-)	882	WP_000373076.1	mechanosensitive ion channel family protein	-
E3S73_RS08490 (E3S73_08490)	-	1685466..1686311 (-)	846	WP_001573568.1	ParB/RepB/Spo0J family partition protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=416683 E3S73_RS08460 WP_000934799.1 1681748..1682251(-) (ssbA) [Staphylococcus aureus strain UP_322]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=416683 E3S73_RS08460 WP_000934799.1 1681748..1682251(-) (ssbA) [Staphylococcus aureus strain UP_322]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365