Detailed information NTG0416367

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: H7788_RS05490
• Genome accession: NZ_CP060647
• Coordinates: 1097816..1098778 (-)
• Length: 320 a.a.
• NCBI ID: WP_002983995.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY136
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1092816..1103778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7788_RS05475 (H7788_05475)	-	1093654..1094361 (-)	708	WP_002989211.1	O-methyltransferase	-
H7788_RS05480 (H7788_05480)	-	1094427..1095623 (-)	1197	WP_002995765.1	OFA family MFS transporter	-
H7788_RS05485 (H7788_05485)	pepF	1095998..1097803 (-)	1806	WP_030127119.1	oligoendopeptidase F	Regulator
H7788_RS05490 (H7788_05490)	coiA	1097816..1098778 (-)	963	WP_002983995.1	competence protein CoiA	Machinery gene
H7788_RS05495 (H7788_05495)	-	1099073..1099789 (-)	717	WP_030127120.1	pseudouridine synthase	-
H7788_RS05500 (H7788_05500)	nagB	1099908..1100612 (-)	705	WP_021340997.1	glucosamine-6-phosphate deaminase	-
H7788_RS05505 (H7788_05505)	queA	1100814..1101842 (+)	1029	WP_030127121.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
H7788_RS05510 (H7788_05510)	-	1101849..1103069 (+)	1221	WP_030127122.1	DUF3114 domain-containing protein	-
H7788_RS05515 (H7788_05515)	-	1103183..1103773 (-)	591	WP_030127123.1	serine hydrolase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37801.25 Da
• Isoelectric Point: 10.2848

>NTDB_id=416367 H7788_RS05490 WP_002983995.1 1097816..1098778(-) (coiA) [Streptococcus pyogenes strain TSPY136]
MTKILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=416367 H7788_RS05490 WP_002983995.1 1097816..1098778(-) (coiA) [Streptococcus pyogenes strain TSPY136]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTCGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTTTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTGCTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCATAATATTATGGAAATGTTTCGGTTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTACAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403