Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | E3S98_RS13715 | Genome accession | NZ_CP047786 |
| Coordinates | 2782802..2783272 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934769.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1150 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2777802..2788272
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S98_RS13675 (E3S98_13675) | - | 2777814..2778137 (+) | 324 | WP_061823677.1 | DUF771 domain-containing protein | - |
| E3S98_RS13680 (E3S98_13680) | - | 2778134..2778295 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| E3S98_RS13685 (E3S98_13685) | - | 2778390..2778692 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| E3S98_RS13690 (E3S98_13690) | - | 2778697..2778957 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| E3S98_RS13695 (E3S98_13695) | - | 2778966..2779229 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| E3S98_RS13700 (E3S98_13700) | - | 2779238..2781181 (+) | 1944 | Protein_2658 | AAA family ATPase | - |
| E3S98_RS13705 (E3S98_13705) | - | 2781183..2782103 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| E3S98_RS13710 (E3S98_13710) | - | 2782184..2782801 (+) | 618 | WP_078169454.1 | MBL fold metallo-hydrolase | - |
| E3S98_RS13715 (E3S98_13715) | ssbA | 2782802..2783272 (+) | 471 | WP_000934769.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S98_RS13720 (E3S98_13720) | - | 2783302..2784195 (+) | 894 | WP_000148329.1 | DnaD domain protein | - |
| E3S98_RS13725 (E3S98_13725) | - | 2784202..2784420 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| E3S98_RS13730 (E3S98_13730) | - | 2784429..2784833 (+) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3S98_RS13735 (E3S98_13735) | - | 2784846..2785214 (+) | 369 | WP_000101270.1 | SA1788 family PVL leukocidin-associated protein | - |
| E3S98_RS13740 (E3S98_13740) | - | 2785218..2785460 (+) | 243 | WP_000131377.1 | phi PVL orf 51-like protein | - |
| E3S98_RS13745 (E3S98_13745) | - | 2785474..2785860 (+) | 387 | WP_061745477.1 | hypothetical protein | - |
| E3S98_RS13975 | - | 2785857..2786051 (+) | 195 | WP_000983954.1 | hypothetical protein | - |
| E3S98_RS13750 (E3S98_13750) | - | 2786048..2786497 (+) | 450 | WP_000982708.1 | YopX family protein | - |
| E3S98_RS13755 (E3S98_13755) | - | 2786494..2786778 (+) | 285 | WP_001105621.1 | hypothetical protein | - |
| E3S98_RS13760 (E3S98_13760) | - | 2786771..2787019 (+) | 249 | WP_001065083.1 | DUF1024 family protein | - |
| E3S98_RS13765 (E3S98_13765) | - | 2787012..2787548 (+) | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| E3S98_RS13770 (E3S98_13770) | - | 2787585..2787791 (+) | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| E3S98_RS13775 (E3S98_13775) | rinB | 2787788..2787937 (+) | 150 | WP_000595267.1 | transcriptional activator RinB | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17671.55 Da Isoelectric Point: 5.2672
>NTDB_id=416149 E3S98_RS13715 WP_000934769.1 2782802..2783272(+) (ssbA) [Staphylococcus aureus strain UP_1150]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=416149 E3S98_RS13715 WP_000934769.1 2782802..2783272(+) (ssbA) [Staphylococcus aureus strain UP_1150]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |