Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   H7796_RS07210 Genome accession   NZ_CP060640
Coordinates   1484741..1485220 (-) Length   159 a.a.
NCBI ID   WP_231909323.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY764     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1479741..1490220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7796_RS07190 (H7796_07200) - 1479911..1480516 (-) 606 WP_002982799.1 response regulator -
  H7796_RS07195 (H7796_07205) - 1480497..1482059 (-) 1563 WP_002988111.1 ATP-binding protein -
  H7796_RS07200 (H7796_07210) - 1482099..1484005 (-) 1907 Protein_1369 FtsX-like permease family protein -
  H7796_RS07205 (H7796_07215) - 1484007..1484744 (-) 738 WP_228631309.1 ABC transporter ATP-binding protein -
  H7796_RS07210 (H7796_07220) rcrQ 1484741..1485220 (-) 480 WP_231909323.1 ATP-binding cassette domain-containing protein Regulator
  H7796_RS07215 (H7796_07225) - 1485276..1486901 (-) 1626 WP_020905484.1 DUF4135 domain-containing protein -
  H7796_RS07220 (H7796_07230) - 1487069..1488213 (+) 1145 WP_148842977.1 IS3 family transposase -
  H7796_RS07225 (H7796_07235) - 1488241..1488402 (-) 162 WP_228631310.1 type A2 lanthipeptide -

Sequence


Protein


Download         Length: 159 a.a.        Molecular weight: 18604.28 Da        Isoelectric Point: 6.6377

>NTDB_id=415728 H7796_RS07210 WP_231909323.1 1484741..1485220(-) (rcrQ) [Streptococcus pyogenes strain TSPY764]
MFDGDVMYNISLGRESVTEKQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRILVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=415728 H7796_RS07210 WP_231909323.1 1484741..1485220(-) (rcrQ) [Streptococcus pyogenes strain TSPY764]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAACCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTTTAGCAAGAGAACTTGTAACCACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGATTTTGGTTACCCA
CAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains


Predicted by InterProScan.

(31-81)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371

  comA Streptococcus pneumoniae Rx1

38.926

93.711

0.365

  comA Streptococcus pneumoniae D39

38.926

93.711

0.365

  comA Streptococcus pneumoniae R6

38.926

93.711

0.365

  comA Streptococcus mitis NCTC 12261

38.926

93.711

0.365

  comA Streptococcus mitis SK321

38.926

93.711

0.365

  comA/nlmT Streptococcus mutans UA159

38.926

93.711

0.365

  comA Streptococcus pneumoniae TIGR4

38.926

93.711

0.365


Multiple sequence alignment