Detailed information NTG0415653

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: H7796_RS00265
• Genome accession: NZ_CP060640
• Coordinates: 48399..49397 (+)
• Length: 332 a.a.
• NCBI ID: WP_063629365.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY764
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 43399..54397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7796_RS00250 (H7796_00255)	-	44124..45821 (+)	1698	WP_020904816.1	AIPR family protein	-
H7796_RS00255 (H7796_00260)	purB	45839..47131 (+)	1293	WP_228631392.1	adenylosuccinate lyase	-
H7796_RS00260 (H7796_00265)	comR	47262..48173 (+)	912	WP_136069620.1	transcriptional regulator Rgg4/ComR	Regulator
H7796_RS08560	comS	48257..48352 (+)	96	WP_198462994.1	quorum-sensing system DWW-type pheromone	Regulator
H7796_RS00265 (H7796_00270)	ruvB	48399..49397 (+)	999	WP_063629365.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
H7796_RS00270 (H7796_00275)	-	49535..49972 (+)	438	WP_002994668.1	low molecular weight protein-tyrosine-phosphatase	-
H7796_RS00275 (H7796_00280)	-	49995..50396 (+)	402	WP_011017240.1	MORN repeat-containing protein	-
H7796_RS00280 (H7796_00285)	-	50393..52168 (+)	1776	WP_136118814.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37533.05 Da
• Isoelectric Point: 5.3005

>NTDB_id=415653 H7796_RS00265 WP_063629365.1 48399..49397(+) (ruvB) [Streptococcus pyogenes strain TSPY764]
MARILDNNVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIIT
AQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEVYEPYLIQKGFLMRTRTGRVATQK
AYRHLGYPYQNT

Nucleotide

• Length: 999 bp

>NTDB_id=415653 H7796_RS00265 WP_063629365.1 48399..49397(+) (ruvB) [Streptococcus pyogenes strain TSPY764]
ATGGCTAGAATTTTAGACAATAATGTAATGGGAAATGAGGAGTTTTCGGATCGGACTCTTCGCCCTCAATATCTACACGA
ATATATTGGACAAGATAAAGTTAAGGAACAATTCGCTATTTTTATAGAAGCAGCTAAAAGACGTGACGAATCTTTAGACC
ATGTTTTATTATTTGGACCTCCAGGACTGGGAAAAACAACAATGGCATTTGTGATTGCCAATGAATTGGGAGTTAATTTA
AAGCAAACTTCAGGTCCTGCCGTTGAGAAAGCTGGAGATTTGGTAGCTATTTTAAATGAATTAGAACCAGGGGATATTTT
GTTTATTGATGAAATTCACCGCATGCCAATGTCTGTCGAGGAAGTACTATATAGTGCTATGGAAGACTTCTATATTGATA
TTATGATTGGCGCTGGAGATACTAGTCGTAGTATTCATTTGGATCTGCCTCCATTTACATTGATTGGTGCTACTACACGT
GCAGGCATGTTATCTAATCCCCTCAGAGCTCGTTTTGGTATCACTGGTCACATGGAATACTATCAAGAAAAGGATTTGAC
AGAGATTGTGGAGCGTACAGCTACTATTTTTGAAATAAAAATAGACCATGAAGCTGCACGGAAATTAGCTTGTCGCAGTA
GAGGAACGCCCCGCATTGCTAATCGATTACTAAAACGAGTGCGTGATTATGCTCAAATTATTGGTGATGGCATCATAACG
GCTCAAATAACTGATAGAGCTTTGACTATGTTAGATGTTGACCGCGAAGGTCTCGATTACATTGATCAGAAAATTTTACG
AACGATGATTGAGATGTATCAGGGAGGGCCAGTTGGTTTGGGGACATTATCTGTGAATATTGCCGAGGAGCGTAATACAG
TTGAAGAGGTGTATGAACCCTACTTAATTCAAAAAGGCTTTCTCATGCGAACACGAACAGGTCGTGTAGCGACTCAAAAG
GCTTATCGTCATCTTGGCTATCCCTATCAAAACACTTAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	84.545	99.398	0.84
ruvB	Streptococcus pneumoniae D39	84.545	99.398	0.84
ruvB	Streptococcus pneumoniae TIGR4	84.242	99.398	0.837
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.133	97.289	0.575
ruvB	Helicobacter pylori 26695	49.24	99.096	0.488
ruvB	Synechocystis sp. PCC 6803	50.479	94.277	0.476