Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H7969_RS05705 | Genome accession | NZ_CP060280 |
| Coordinates | 1105341..1105865 (-) | Length | 174 a.a. |
| NCBI ID | WP_002212976.1 | Uniprot ID | P66849 |
| Organism | Neisseria meningitidis strain LNP24198 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1100341..1110865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7969_RS05695 (H7969_05695) | fumC | 1102440..1103828 (+) | 1389 | WP_002220629.1 | class II fumarate hydratase | - |
| H7969_RS05700 (H7969_05700) | - | 1103893..1104816 (-) | 924 | WP_002240631.1 | DMT family transporter | - |
| H7969_RS05705 (H7969_05705) | ssb | 1105341..1105865 (-) | 525 | WP_002212976.1 | single-stranded DNA-binding protein | Machinery gene |
| H7969_RS05710 (H7969_05710) | - | 1105869..1107251 (-) | 1383 | WP_002247848.1 | MFS transporter | - |
| H7969_RS05715 (H7969_05715) | - | 1107362..1107985 (-) | 624 | WP_002212974.1 | lytic transglycosylase domain-containing protein | - |
| H7969_RS05720 (H7969_05720) | - | 1108045..1108284 (+) | 240 | WP_173026321.1 | hypothetical protein | - |
| H7969_RS11495 | - | 1108675..1109093 (-) | 419 | Protein_1123 | hypothetical protein | - |
| H7969_RS05735 (H7969_05735) | - | 1109130..1109621 (-) | 492 | WP_002219860.1 | REP-associated tyrosine transposase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19452.65 Da Isoelectric Point: 5.8354
>NTDB_id=414762 H7969_RS05705 WP_002212976.1 1105341..1105865(-) (ssb) [Neisseria meningitidis strain LNP24198]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=414762 H7969_RS05705 WP_002212976.1 1105341..1105865(-) (ssb) [Neisseria meningitidis strain LNP24198]
ATGTCATTGAACAAAGTCATCCTCATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCGGT
TTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAACGTGTAGAGCGTACTGAGTGGCACAACA
TCACCATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAACGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGTGCGCCTTACGAGGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCGC
AGCAAAGCCGGCAGCCCGCCTCCGACGCGCCGTCCCATCCCCAAGAAGCACCAGCCGCGCCGCGCCGCCAACCCGTGCCT
GCCGCCGCCCCGGTCGAGGACATTGACGACGATATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTCATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCGGT
TTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAACGTGTAGAGCGTACTGAGTGGCACAACA
TCACCATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAACGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGTGCGCCTTACGAGGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCGC
AGCAAAGCCGGCAGCCCGCCTCCGACGCGCCGTCCCATCCCCAAGAAGCACCAGCCGCGCCGCGCCGCCAACCCGTGCCT
GCCGCCGCCCCGGTCGAGGACATTGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria meningitidis MC58 |
100 |
100 |
1 |
| ssb | Neisseria gonorrhoeae MS11 |
98.851 |
100 |
0.989 |
| ssb | Vibrio cholerae strain A1552 |
47.778 |
100 |
0.494 |
| ssb | Glaesserella parasuis strain SC1401 |
43.956 |
100 |
0.46 |