Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | I6A80_RS27035 | Genome accession | NZ_CP060241 |
| Coordinates | 5860710..5861075 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain C-I-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5855710..5866075
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6A80_RS27020 (I6A80_005541) | pilK | 5857054..5857929 (-) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
| I6A80_RS27025 (I6A80_005542) | pilJ | 5857990..5860038 (-) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| I6A80_RS27030 (I6A80_005543) | - | 5860123..5860659 (-) | 537 | WP_033956703.1 | chemotaxis protein CheW | - |
| I6A80_RS27035 (I6A80_005544) | pilH | 5860710..5861075 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| I6A80_RS27040 (I6A80_005545) | pilG | 5861122..5861529 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| I6A80_RS27045 (I6A80_005546) | gshB | 5861784..5862737 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| I6A80_RS27050 (I6A80_005547) | - | 5862884..5863777 (+) | 894 | WP_003162015.1 | energy transducer TonB | - |
| I6A80_RS27055 (I6A80_005548) | - | 5863826..5864395 (+) | 570 | WP_033956709.1 | YqgE/AlgH family protein | - |
| I6A80_RS27060 (I6A80_005549) | ruvX | 5864395..5864829 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| I6A80_RS27065 (I6A80_005550) | pyrR | 5864941..5865453 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=413843 I6A80_RS27035 WP_003084587.1 5860710..5861075(-) (pilH) [Pseudomonas aeruginosa strain C-I-1]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=413843 I6A80_RS27035 WP_003084587.1 5860710..5861075(-) (pilH) [Pseudomonas aeruginosa strain C-I-1]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |