Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HMPREF0833_RS04455 Genome accession   NC_015678
Coordinates   930735..931544 (-) Length   269 a.a.
NCBI ID   WP_003015609.1    Uniprot ID   I2NQ90
Organism   Streptococcus parasanguinis ATCC 15912     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 925735..936544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0833_RS04440 (HMPREF0833_10899) smc 925902..929438 (-) 3537 WP_013903905.1 chromosome segregation protein SMC -
  HMPREF0833_RS04445 (HMPREF0833_10900) rnc 929429..930130 (-) 702 WP_013903906.1 ribonuclease III -
  HMPREF0833_RS04450 (HMPREF0833_10901) - 930230..930616 (-) 387 WP_013903907.1 YbaN family protein -
  HMPREF0833_RS04455 (HMPREF0833_10902) vicX 930735..931544 (-) 810 WP_003015609.1 MBL fold metallo-hydrolase Regulator
  HMPREF0833_RS04460 (HMPREF0833_10903) micB 931552..932904 (-) 1353 WP_013903909.1 cell wall metabolism sensor histidine kinase VicK Regulator
  HMPREF0833_RS04465 (HMPREF0833_10904) micA 932897..933598 (-) 702 WP_003015620.1 response regulator YycF Regulator
  HMPREF0833_RS04470 (HMPREF0833_10905) thrS 933755..935698 (-) 1944 WP_013903910.1 threonine--tRNA ligase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29755.78 Da        Isoelectric Point: 6.2817

>NTDB_id=41378 HMPREF0833_RS04455 WP_003015609.1 930735..931544(-) (vicX) [Streptococcus parasanguinis ATCC 15912]
MTEKGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGTKYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRLAG
IVADADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMEN
QLARADLAVGHDFEVLDTSPDTATPLTKI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=41378 HMPREF0833_RS04455 WP_003015609.1 930735..931544(-) (vicX) [Streptococcus parasanguinis ATCC 15912]
ATGACAGAAAAGGGATTTAAGTATAGTATTTTAGCTTCAGGTTCTAGTGGGAATTCTTTCTACCTTGAGACACCAAAGAA
AAAACTGCTTATTGATGCAGGGCTATCAGGGAAAAAGATTACGGGACTATTGGCTGAAATTGATCGCAAACCAGAAGACT
TAGATGCCATTTTGATTACGCACGAACACTCAGATCATATTCATGGTGTGGGTGTTTTAGCGCGGAAATATGGCATGGAT
CTATATGCTAATGAAGCAACTTGGAAGGCAATGGAAGGCACCAAGTATCTAGGAAAGGTCGATGATGCTCAAAAGCACAT
CTTTGAAATGGGGAAGACCAAGACATTTGGCGATATCGATATCGAAAGTTTTGGTGTCAGTCACGATGCTGCAGCCCCTC
AATTTTATCGCTTTATGAAGGATGGCAAGAGCTTCGTCATGCTGACGGATACGGGCTATGTGAGTGATCGCTTGGCAGGC
ATCGTCGCAGATGCGGATGGCTATCTGATTGAGTCCAACCACGATGTAGAGATCCTTCGAGCAGGTTCTTACGCTTGGCG
CTTGAAGCAGCGGATCTTGTCAGACCTAGGCCACCTTTCTAACGAAGATGGTGCAGATGCCATGATCCGAACCTTGGGAA
ATCGCACCAAAAAGATTTATCTGGGACATTTGTCAAAAGAGAACAATATCAAAGAATTGGCCCATATGACCATGGAGAAT
CAACTGGCTCGAGCAGATCTAGCTGTTGGCCATGATTTTGAGGTGTTAGATACCTCGCCAGATACCGCGACCCCTTTGAC
GAAGATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2NQ90

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment