Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GTW28_RS12610 | Genome accession | NZ_CP047485 |
| Coordinates | 2446166..2447236 (-) | Length | 356 a.a. |
| NCBI ID | WP_004399124.1 | Uniprot ID | A0A809FNW6 |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2441166..2452236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS12565 (GTW28_12565) | tapA | 2441644..2442405 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GTW28_RS12570 (GTW28_12570) | yqzG | 2442677..2443003 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GTW28_RS12575 (GTW28_12575) | spoIITA | 2443045..2443224 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GTW28_RS12580 (GTW28_12580) | comGG | 2443296..2443670 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| GTW28_RS12585 (GTW28_12585) | comGF | 2443671..2444054 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| GTW28_RS12590 (GTW28_12590) | comGE | 2444080..2444427 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| GTW28_RS12595 (GTW28_12595) | comGD | 2444411..2444842 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| GTW28_RS12600 (GTW28_12600) | comGC | 2444832..2445128 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| GTW28_RS12605 (GTW28_12605) | comGB | 2445142..2446179 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| GTW28_RS12610 (GTW28_12610) | comGA | 2446166..2447236 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| GTW28_RS12615 (GTW28_12615) | - | 2447448..2447645 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| GTW28_RS12620 (GTW28_12620) | corA | 2447647..2448600 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GTW28_RS12625 (GTW28_12625) | yqhB | 2448743..2450071 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| GTW28_RS12630 (GTW28_12630) | rsbRD | 2450124..2450960 (-) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
| GTW28_RS12640 (GTW28_12640) | mgsR | 2451184..2451564 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| GTW28_RS12645 (GTW28_12645) | yqgY | 2451796..2452041 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=413690 GTW28_RS12610 WP_004399124.1 2446166..2447236(-) (comGA) [Bacillus subtilis strain BJQ0005]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=413690 GTW28_RS12610 WP_004399124.1 2446166..2447236(-) (comGA) [Bacillus subtilis strain BJQ0005]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATTGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGTCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGGAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATTGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGTCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGGAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |