Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GTW28_RS12605 | Genome accession | NZ_CP047485 |
| Coordinates | 2445142..2446179 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2440142..2451179
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS12555 (GTW28_12555) | tasA | 2440239..2441024 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| GTW28_RS12560 (GTW28_12560) | sipW | 2441088..2441660 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| GTW28_RS12565 (GTW28_12565) | tapA | 2441644..2442405 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GTW28_RS12570 (GTW28_12570) | yqzG | 2442677..2443003 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GTW28_RS12575 (GTW28_12575) | spoIITA | 2443045..2443224 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GTW28_RS12580 (GTW28_12580) | comGG | 2443296..2443670 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| GTW28_RS12585 (GTW28_12585) | comGF | 2443671..2444054 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| GTW28_RS12590 (GTW28_12590) | comGE | 2444080..2444427 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| GTW28_RS12595 (GTW28_12595) | comGD | 2444411..2444842 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| GTW28_RS12600 (GTW28_12600) | comGC | 2444832..2445128 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| GTW28_RS12605 (GTW28_12605) | comGB | 2445142..2446179 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| GTW28_RS12610 (GTW28_12610) | comGA | 2446166..2447236 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| GTW28_RS12615 (GTW28_12615) | - | 2447448..2447645 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| GTW28_RS12620 (GTW28_12620) | corA | 2447647..2448600 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GTW28_RS12625 (GTW28_12625) | yqhB | 2448743..2450071 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| GTW28_RS12630 (GTW28_12630) | rsbRD | 2450124..2450960 (-) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=413689 GTW28_RS12605 WP_029317912.1 2445142..2446179(-) (comGB) [Bacillus subtilis strain BJQ0005]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=413689 GTW28_RS12605 WP_029317912.1 2445142..2446179(-) (comGB) [Bacillus subtilis strain BJQ0005]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |