Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GTH24_RS18200 | Genome accession | NZ_CP047344 |
| Coordinates | 3882619..3883146 (+) | Length | 175 a.a. |
| NCBI ID | WP_072070932.1 | Uniprot ID | A0A6G6SRL5 |
| Organism | Proteus vulgaris strain ZN3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3877619..3888146
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTH24_RS18195 (GTH24_18085) | uvrA | 3879532..3882366 (-) | 2835 | WP_072070931.1 | excinuclease ABC subunit UvrA | - |
| GTH24_RS18200 (GTH24_18090) | ssb | 3882619..3883146 (+) | 528 | WP_072070932.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| GTH24_RS18205 (GTH24_18095) | zur | 3883334..3883864 (+) | 531 | WP_072070933.1 | zinc uptake transcriptional repressor Zur | - |
| GTH24_RS18210 (GTH24_18100) | - | 3883898..3884203 (-) | 306 | WP_072070950.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTH24_RS18215 (GTH24_18105) | - | 3884193..3884447 (-) | 255 | WP_072070934.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| GTH24_RS18220 (GTH24_18110) | lexA | 3884608..3885219 (-) | 612 | WP_072070935.1 | transcriptional repressor LexA | - |
| GTH24_RS18225 (GTH24_18115) | - | 3885347..3885718 (-) | 372 | WP_006536373.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18904.94 Da Isoelectric Point: 4.9468
>NTDB_id=412857 GTH24_RS18200 WP_072070932.1 3882619..3883146(+) (ssb) [Proteus vulgaris strain ZN3]
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGSMQMLGGRGGQDSAPSQGGQGGWGQPQQPQASQQFSGGAQSRPAQQPAAAPA
PNNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGSMQMLGGRGGQDSAPSQGGQGGWGQPQQPQASQQFSGGAQSRPAQQPAAAPA
PNNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=412857 GTH24_RS18200 WP_072070932.1 3882619..3883146(+) (ssb) [Proteus vulgaris strain ZN3]
ATGGCGAGCAGAGGCGTAAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
CGGTGCAGTTGCCAACCTAACACTGGCAACATCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAAAAAACCG
AGTGGCACCGTGTGGTAATTTTCGGCAAATTAGCTGAAATTGCAGGCGAATATCTGCGTAAAGGTTCACAAGTGTATATC
GAAGGTCAATTACAAACACGTAAATGGCAAGACCAAAGTGGTCAAGACAGATATAGCACTGAAGTTGTCGTTAACATCGG
TGGCTCAATGCAGATGTTAGGTGGTCGTGGTGGTCAAGATAGTGCGCCTTCACAAGGTGGTCAAGGCGGTTGGGGTCAAC
CACAACAGCCACAAGCATCACAACAATTTAGCGGTGGTGCGCAATCTCGCCCAGCACAACAACCCGCAGCAGCTCCAGCA
CCGAACAATGAACCTCCAATGGATTTCGATGACGATATTCCGTTCTAA
ATGGCGAGCAGAGGCGTAAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
CGGTGCAGTTGCCAACCTAACACTGGCAACATCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAAAAAACCG
AGTGGCACCGTGTGGTAATTTTCGGCAAATTAGCTGAAATTGCAGGCGAATATCTGCGTAAAGGTTCACAAGTGTATATC
GAAGGTCAATTACAAACACGTAAATGGCAAGACCAAAGTGGTCAAGACAGATATAGCACTGAAGTTGTCGTTAACATCGG
TGGCTCAATGCAGATGTTAGGTGGTCGTGGTGGTCAAGATAGTGCGCCTTCACAAGGTGGTCAAGGCGGTTGGGGTCAAC
CACAACAGCCACAAGCATCACAACAATTTAGCGGTGGTGCGCAATCTCGCCCAGCACAACAACCCGCAGCAGCTCCAGCA
CCGAACAATGAACCTCCAATGGATTTCGATGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
72.973 |
100 |
0.771 |
| ssb | Glaesserella parasuis strain SC1401 |
56.757 |
100 |
0.6 |
| ssb | Neisseria meningitidis MC58 |
48.045 |
100 |
0.491 |
| ssb | Neisseria gonorrhoeae MS11 |
48.045 |
100 |
0.491 |