Detailed information NTG0410880

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: H2783_RS13085
• Genome accession: NZ_CP059548
• Coordinates: 2816075..2817193 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain B9
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2811075..2822193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2783_RS13075 (H2783_13065)	-	2814191..2814883 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
H2783_RS13080 (H2783_13070)	pilT	2815010..2816047 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
H2783_RS13085 (H2783_13075)	pilU	2816075..2817193 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
H2783_RS13090 (H2783_13080)	fur	2817263..2817700 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
H2783_RS13095 (H2783_13085)	-	2817812..2818210 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
H2783_RS13100 (H2783_13090)	-	2818265..2818588 (-)	324	WP_000442587.1	RnfH family protein	-
H2783_RS13105 (H2783_13095)	-	2818588..2819655 (-)	1068	WP_002019572.1	hypothetical protein	-
H2783_RS13110 (H2783_13100)	-	2819808..2820263 (-)	456	WP_000782976.1	bacteriohemerythrin	-
H2783_RS13115 (H2783_13105)	-	2820516..2821364 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=410880 H2783_RS13085 WP_000347039.1 2816075..2817193(+) (pilU) [Acinetobacter baumannii strain B9]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=410880 H2783_RS13085 WP_000347039.1 2816075..2817193(+) (pilU) [Acinetobacter baumannii strain B9]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395