Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | GE573_RS10055 | Genome accession | NZ_CP047119 |
| Coordinates | 1953874..1954164 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain AK-0 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1948874..1959164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE573_RS10015 (GE573_01997) | darA | 1948891..1949220 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| GE573_RS10020 (GE573_01998) | - | 1949233..1949673 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| GE573_RS10025 (GE573_01999) | holB | 1949685..1950674 (+) | 990 | WP_031379324.1 | DNA polymerase III subunit delta' | - |
| GE573_RS10030 (GE573_02000) | ricT | 1950677..1951504 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| GE573_RS10035 (GE573_02001) | yabA | 1951519..1951878 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| GE573_RS10040 (GE573_02002) | - | 1951939..1952682 (+) | 744 | WP_015239018.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GE573_RS10045 (GE573_02003) | - | 1952669..1952968 (+) | 300 | WP_190664746.1 | GIY-YIG nuclease family protein | - |
| GE573_RS10050 (GE573_02004) | rsmI | 1952943..1953824 (+) | 882 | WP_011996168.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GE573_RS10055 (GE573_02005) | abrB | 1953874..1954164 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| GE573_RS10060 (GE573_02006) | metG | 1954648..1956639 (+) | 1992 | WP_190664747.1 | methionine--tRNA ligase | - |
| GE573_RS10065 (GE573_02007) | - | 1956716..1957483 (+) | 768 | WP_025284081.1 | TatD family hydrolase | - |
| GE573_RS10070 (GE573_02008) | - | 1957618..1958943 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=410680 GE573_RS10055 WP_169510469.1 1953874..1954164(-) (abrB) [Bacillus velezensis strain AK-0]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=410680 GE573_RS10055 WP_169510469.1 1953874..1954164(-) (abrB) [Bacillus velezensis strain AK-0]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |