Detailed information NTG0408384

Bioinformatically predicted

Overview

• Name: tfoX
• Type: Regulator
• Locus tag: GPY06_RS17525
• Genome accession: NZ_CP046820
• Coordinates: 2543261..2543848 (+)
• Length: 195 a.a.
• NCBI ID: WP_001005361.1
• Uniprot ID: A0A0Q0JLK0
• Organism: Vibrio metoecus strain 2011V-1015
• Function: master regulator of natural competence (predicted from homology) Competence regulation

Genomic Context

Location: 2538261..2548848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY06_RS17505	panP	2538586..2540232 (-)	1647	WP_000253252.1	pyridoxal-dependent aspartate 1-decarboxylase PanP	-
GPY06_RS17510	-	2540342..2540851 (-)	510	WP_000826840.1	hypothetical protein	-
GPY06_RS17515	-	2541038..2541943 (-)	906	WP_055028629.1	lysine exporter LysO family protein	-
GPY06_RS17520	-	2541966..2542886 (-)	921	WP_009355303.1	HDOD domain-containing protein	-
GPY06_RS17525	tfoX	2543261..2543848 (+)	588	WP_001005361.1	TfoX/Sxy family DNA transformation protein	Regulator
GPY06_RS17530	-	2543944..2544498 (-)	555	WP_001232587.1	hypothetical protein	-
GPY06_RS17535	-	2544688..2545185 (-)	498	WP_158120531.1	response regulator	-
GPY06_RS17540	-	2545188..2547131 (-)	1944	WP_158120532.1	ATP-binding protein	-
GPY06_RS17545	-	2547354..2548619 (+)	1266	WP_055028625.1	DUF945 family protein	-

Sequence

Protein

• Length: 195 a.a.
• Molecular weight: 22810.04 Da
• Isoelectric Point: 7.3204

>NTDB_id=408384 GPY06_RS17525 WP_001005361.1 2543261..2543848(+) (tfoX) [Vibrio metoecus strain 2011V-1015]
MNEQQFFDYVNKFGAYQKRSMFGGIGLFQHDAMYVLVSEDRIFVRGGEELDPELIALGCEKYRHVKKQTTATVNYYDITD
LYEKNHPELDSIIERSIQFSVNQREFQRSAASRRLRDLPNMQLTLERMVKKAGIDDVETFMSMGAPEVFNKVRQAYGSDV
DVKLLWKFAGAIEGIHWKLLQEPRKRQLLESCQQR

Nucleotide

• Length: 588 bp

>NTDB_id=408384 GPY06_RS17525 WP_001005361.1 2543261..2543848(+) (tfoX) [Vibrio metoecus strain 2011V-1015]
ATGAATGAGCAACAGTTTTTCGATTACGTAAACAAGTTTGGCGCCTACCAAAAACGCTCGATGTTTGGTGGGATTGGTTT
GTTTCAACATGATGCAATGTACGTGTTAGTCAGTGAAGATCGAATTTTTGTCCGTGGTGGCGAAGAGCTTGATCCTGAAC
TGATTGCTTTGGGATGTGAAAAATATCGCCATGTGAAGAAGCAGACAACCGCAACGGTAAACTATTACGACATCACTGAT
TTATATGAAAAAAATCACCCGGAGCTAGACTCCATTATCGAACGTTCCATCCAGTTTTCGGTGAATCAGCGTGAGTTTCA
ACGTTCAGCCGCGAGCCGTCGTTTGCGTGATCTGCCCAATATGCAGCTCACTTTAGAGCGCATGGTGAAAAAAGCGGGGA
TTGATGATGTTGAAACCTTCATGAGCATGGGTGCTCCGGAAGTGTTTAATAAAGTACGTCAAGCTTACGGTAGCGATGTG
GACGTCAAACTGCTGTGGAAATTTGCGGGAGCTATTGAAGGGATCCATTGGAAGTTGTTACAAGAGCCACGTAAGCGTCA
GCTACTTGAAAGCTGTCAGCAACGTTAG

Domains

Predicted by InterproScan.

• TfoX C-terminal domain (TfoX_C) (112-190)

• TfoX N-terminal domain (TfoX_N) (9-99)

3D structure

• AlphaFold DB: A0A0Q0JLK0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoX	Vibrio cholerae O1 biovar El Tor str. N16961	96.923	100	0.969
tfoX	Vibrio cholerae O1 biovar El Tor strain DRC-193A	96.923	100	0.969
tfoX	Vibrio cholerae O1 biovar El Tor strain P27459	96.923	100	0.969
tfoX	Vibrio cholerae O1 biovar El Tor strain E7946	96.923	100	0.969
tfoX	Vibrio cholerae strain A1552	96.923	100	0.969
tfoX	Vibrio campbellii strain DS40M4	68.394	98.974	0.677
tfoX	Vibrio parahaemolyticus RIMD 2210633	68.394	98.974	0.677
tfoX	Aliivibrio fischeri ES114	59.043	96.41	0.569