Detailed information NTG0407868

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: HZZ00_RS05120
• Genome accession: NZ_CP058977
• Coordinates: 1136053..1137339 (+)
• Length: 428 a.a.
• NCBI ID: WP_161297731.1
• Uniprot ID: A0ABW0WFX4
• Organism: Streptomyces sp. NEAU-sy36
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1131053..1142339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZZ00_RS05090 (HZZ00_05090)	-	1131548..1132267 (+)	720	WP_374028543.1	tyrosine-type recombinase/integrase	-
HZZ00_RS05105 (HZZ00_05105)	tig	1132832..1134202 (+)	1371	WP_180331093.1	trigger factor	-
HZZ00_RS05110 (HZZ00_05110)	-	1134543..1135148 (+)	606	WP_180333392.1	ATP-dependent Clp protease proteolytic subunit	-
HZZ00_RS05115 (HZZ00_05115)	clpP	1135218..1135883 (+)	666	WP_070027104.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HZZ00_RS05120 (HZZ00_05120)	clpX	1136053..1137339 (+)	1287	WP_161297731.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
HZZ00_RS05125 (HZZ00_05125)	-	1137415..1138461 (-)	1047	WP_180331094.1	hypothetical protein	-
HZZ00_RS05130 (HZZ00_05130)	-	1138599..1141223 (+)	2625	WP_180331095.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46642.50 Da
• Isoelectric Point: 4.7331

>NTDB_id=407868 HZZ00_RS05120 WP_161297731.1 1136053..1137339(+) (clpX) [Streptomyces sp. NEAU-sy36]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGASGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATILSKRELEAKDVFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=407868 HZZ00_RS05120 WP_161297731.1 1136053..1137339(+) (clpX) [Streptomyces sp. NEAU-sy36]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCA
GCGAGGTGCGCTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTGTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGAGCGGCCG
GGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCGCAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCCACGGCGCTGACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGTTTCGGCGCGACGATCCTGTCCAAGCGCGAGCTGGAGGCCAAGGACGTCTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCGGTGATCACCTCGGTGCACAACCTCGACCGC
GAGGCGCTGCTGAAGATCCTGGTGGAGCCGCGCAACGCCCTCGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTCGTCCTCTCCAACGTCAACCCGACCCTGATCCCCCGCGACGCGCGCGGCCGGGGCTCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526