Detailed information NTG0040773

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PSEFU_RS14405
• Genome accession: NC_015556
• Coordinates: 3104181..3106403 (-)
• Length: 740 a.a.
• NCBI ID: WP_198136648.1
• Uniprot ID: -
• Organism: Pseudomonas fulva 12-X
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3099181..3111403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSEFU_RS14370 (Psefu_2883)	murB	3099548..3100567 (-)	1020	WP_013791974.1	UDP-N-acetylmuramate dehydrogenase	-
PSEFU_RS14375 (Psefu_2884)	-	3100564..3101028 (-)	465	WP_013791975.1	low molecular weight protein-tyrosine-phosphatase	-
PSEFU_RS14380 (Psefu_2885)	kdsB	3101028..3101792 (-)	765	WP_013791976.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PSEFU_RS14385 (Psefu_2886)	-	3101794..3101979 (-)	186	WP_013791977.1	Trm112 family protein	-
PSEFU_RS14390 (Psefu_2887)	lpxK	3102020..3103027 (-)	1008	WP_013791978.1	tetraacyldisaccharide 4'-kinase	-
PSEFU_RS14395 (Psefu_2888)	-	3103027..3103455 (-)	429	WP_013791979.1	ExbD/TolR family protein	-
PSEFU_RS14400 (Psefu_2889)	exbB	3103452..3104108 (-)	657	WP_013791980.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PSEFU_RS14405 (Psefu_2890)	comA	3104181..3106403 (-)	2223	WP_198136648.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PSEFU_RS14410 (Psefu_2891)	-	3106530..3107774 (-)	1245	WP_013791982.1	lipoprotein-releasing ABC transporter permease subunit	-
PSEFU_RS14415 (Psefu_2892)	lolD	3107774..3108475 (-)	702	WP_013791983.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PSEFU_RS14420 (Psefu_2893)	-	3108468..3109718 (-)	1251	WP_013791984.1	lipoprotein-releasing ABC transporter permease subunit	-
PSEFU_RS14425 (Psefu_2894)	-	3109814..3110386 (+)	573	WP_013791985.1	PilZ domain-containing protein	-
PSEFU_RS14430 (Psefu_2895)	-	3110383..3110679 (+)	297	WP_013791986.1	hypothetical protein	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 81142.06 Da
• Isoelectric Point: 7.6556

>NTDB_id=40773 PSEFU_RS14405 WP_198136648.1 3104181..3106403(-) (comA) [Pseudomonas fulva 12-X]
MRRALLALAAGLLLLRWLPQLPPSAFLFAAALLGLVLLPFRSHLIGLFLLGFSWACLSAQWALDDRLDPALDGRTLWLEG
RVVDLPDVREGVVRFHLAEAHSRRAELPQLLRLSWYGGPEIRAGETWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGGVG
TIKSGQRLSEADGSAAWRDRLRQHMLAKDPHGRAGGLAALVLGDSSGLSVADWRVLQDTGTVHLLVISGQHVTLVAGMFY
GLVFWLARLGWWPRALPWLPVACVLGFVSALGYSLLAGFEVPVQRACAMIGLVLLWRWRFRHLGITLPLLMALVAVLLLE
PLAVLQPGFWLSFGAVGLLILIFAGRLGAWAWWRTLGRAQWAMTVGLLPMLLALGLPISASSPLANLIAVPWVGFAVVPV
ALLGTLLLPVPWVGEALLWLAGLSLEWLFRLLGLMGEWLPAWLPSDLPLWGWLLVALGALFILLPSGVPFRALGLILLLP
LLFTPVERPAEQRAEVWMLDVGQGLSMLVLTRQHALLYDAGPSFGDFDMGERVVLPSLRALDVRELDMLLISHSYNDHSG
GAEAVARGMSVGRVVSGEAPALPTALGAEPCVAEHWTWDGVTFRTWRWNEAADSNQSSCVLVVEAAGERILLTGDIDTRA
ERALIESGLDLSAHWLLAPHHGSRSSSSWALLKAVQPGAVLYSRGRHNAYGHPHPTVLSRYAAFEARAYDSVETGALRID
LGSFAEPQALREIPRFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=40773 PSEFU_RS14405 WP_198136648.1 3104181..3106403(-) (comA) [Pseudomonas fulva 12-X]
TTGCGCCGCGCATTGCTGGCCCTGGCCGCCGGCCTGTTGCTGCTGCGCTGGCTGCCGCAACTGCCACCTAGCGCTTTTCT
GTTTGCAGCCGCTCTGCTCGGGCTCGTGCTGCTGCCGTTTCGCAGCCACCTGATCGGCCTGTTTCTGCTCGGCTTCAGCT
GGGCCTGCCTGTCGGCGCAATGGGCCCTGGATGATCGCCTGGATCCGGCGCTGGACGGCCGCACGCTGTGGCTGGAGGGC
AGGGTGGTGGACCTGCCCGATGTGCGCGAAGGCGTGGTGCGTTTTCACCTGGCCGAGGCGCACTCGCGGCGCGCCGAACT
GCCGCAGCTGCTGCGTCTGTCCTGGTACGGCGGGCCGGAGATTCGCGCCGGTGAAACCTGGCGACTGGCGGTGAACCTCA
AGCGGCCCCATGGGCTGGTCAATCCGCAGTCCTTCGATTACGAAGCCTGGCTGCTGGCTCAGCGTATCGGCGGCGTGGGC
ACCATCAAGTCCGGTCAACGTCTGAGTGAAGCCGACGGCAGCGCAGCGTGGCGCGACCGCTTGCGCCAGCACATGCTCGC
CAAGGATCCCCATGGCCGTGCCGGTGGCCTGGCCGCCCTGGTGCTGGGCGACAGTTCCGGCCTGTCGGTCGCCGACTGGC
GGGTGCTGCAGGACACCGGCACCGTGCACCTGCTGGTGATCTCCGGTCAGCACGTGACGCTGGTGGCCGGCATGTTCTAC
GGTCTGGTGTTCTGGCTGGCCCGCCTGGGCTGGTGGCCGCGGGCGTTGCCCTGGCTGCCGGTGGCTTGCGTCCTGGGCTT
CGTCTCGGCGTTGGGCTACAGCCTGCTGGCGGGTTTCGAAGTGCCGGTGCAGCGTGCCTGCGCGATGATCGGCCTGGTGC
TGTTGTGGCGCTGGCGCTTTCGTCATCTGGGCATCACCTTGCCCTTGTTGATGGCGCTGGTGGCCGTGCTGCTTCTCGAA
CCGCTGGCCGTGCTGCAGCCGGGCTTCTGGCTGTCGTTCGGCGCGGTGGGTTTGCTGATTCTGATTTTCGCCGGGCGCCT
GGGTGCCTGGGCCTGGTGGCGCACCTTGGGGCGCGCGCAGTGGGCGATGACCGTGGGGCTGCTGCCGATGCTGCTGGCCC
TCGGCCTGCCGATCAGTGCCAGCAGCCCGCTGGCCAATCTGATCGCCGTGCCCTGGGTCGGCTTTGCCGTGGTGCCCGTG
GCCTTGCTCGGCACCTTGCTGCTGCCGGTGCCCTGGGTTGGCGAGGCGCTTCTCTGGCTCGCCGGCTTGTCGCTGGAGTG
GCTGTTTCGCCTGCTTGGGCTGATGGGCGAGTGGCTGCCGGCCTGGTTGCCCAGTGACCTGCCGTTGTGGGGCTGGCTGC
TGGTGGCGCTGGGCGCGTTGTTCATTCTATTGCCGAGCGGCGTGCCGTTTCGTGCTCTGGGGCTGATCCTGCTGCTGCCG
TTGCTGTTCACGCCGGTAGAGCGGCCTGCCGAGCAGCGCGCCGAGGTGTGGATGCTGGATGTCGGTCAGGGGCTGTCGAT
GCTGGTGCTGACCCGCCAGCACGCGCTGCTGTATGACGCCGGCCCCAGCTTCGGTGATTTCGACATGGGCGAGCGGGTGG
TGCTGCCGTCGCTACGGGCGTTGGATGTGCGCGAACTGGACATGCTGCTGATCAGCCATTCCTACAACGATCACTCCGGC
GGCGCCGAAGCGGTGGCGCGTGGCATGTCAGTGGGGCGCGTGGTCAGCGGTGAAGCGCCTGCGCTACCAACTGCGCTTGG
CGCCGAGCCTTGCGTAGCGGAGCACTGGACATGGGATGGTGTGACTTTCAGAACCTGGCGCTGGAATGAAGCGGCAGACA
GCAACCAATCCTCCTGCGTGCTGGTGGTCGAGGCTGCCGGCGAGCGTATCCTGCTGACCGGCGATATCGACACCCGGGCC
GAGCGCGCGCTGATCGAGTCGGGGCTCGACCTCAGCGCTCATTGGCTGCTGGCGCCGCATCACGGCAGCCGCAGTTCTTC
CTCGTGGGCCTTGCTCAAGGCCGTGCAGCCGGGCGCCGTGCTGTATTCGCGCGGGCGCCACAATGCCTATGGCCACCCGC
ACCCGACCGTGCTGTCGCGGTACGCCGCCTTCGAGGCGCGGGCTTACGACAGCGTGGAGACCGGTGCGCTGCGTATCGAC
CTCGGCAGTTTTGCCGAGCCGCAGGCACTGCGTGAAATACCGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-678)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (200-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.472	97.297	0.618
comA	Ralstonia pseudosolanacearum GMI1000	36.187	100	0.377