Detailed information NTG0407016

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: SSU16085_RS03070
• Genome accession: NZ_CP058740
• Coordinates: 642142..645408 (+)
• Length: 1088 a.a.
• NCBI ID: WP_192063013.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 16085/3b
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 637142..650408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU16085_RS03060 (SSU16085_00624)	-	637535..637699 (+)	165	WP_024381780.1	hypothetical protein	-
SSU16085_RS03065 (SSU16085_00625)	-	638123..641851 (+)	3729	WP_105152519.1	MucBP domain-containing protein	-
SSU16085_RS03070 (SSU16085_00626)	rexB	642142..645408 (+)	3267	WP_192063013.1	ATP-dependent nuclease subunit B	Machinery gene
SSU16085_RS03075 (SSU16085_00627)	rexA	645408..649061 (+)	3654	WP_024394348.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
SSU16085_RS03080 (SSU16085_00628)	plsY	649071..649715 (-)	645	WP_009909724.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124536.84 Da
• Isoelectric Point: 5.0928

>NTDB_id=407016 SSU16085_RS03070 WP_192063013.1 642142..645408(+) (rexB) [Streptococcus suis strain 16085/3b]
MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQRDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
ESFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQVIYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHIHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFVANSRADYDTEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGAALLEKFMA
FLEAIELPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVHNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDQAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGPD

Nucleotide

• Length: 3267 bp

>NTDB_id=407016 SSU16085_RS03070 WP_192063013.1 642142..645408(+) (rexB) [Streptococcus suis strain 16085/3b]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTATATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCAGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCAATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGAGAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAAGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTGGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTAATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGTCATCTATGCGGAAGGCAATGTCTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGATCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTGGAGCAGGTAGCAACGGCAATTCGCCAACACATACACCAA
GGAGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAAATTTTTGACAA
ATATGATATTCCCTACTATTTTGGTAAGGCAGAGGAGATGAGCCATCATCCCCTAGTCCACTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGTGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACTTGTTTGAGTCCTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTGTGGCCAA
TAGCAGAGCTGACTATGACACTGAAGTTATTAAGGAGAAAAGACTTGTCTATGATTTGAATGTTTTGGAACCCCTACGTG
CTAAGATTATGGAACCTTTGAACCAGTTGTTTAAGGCTGGACCACAATCTGGAGCAGCCTTGCTTGAGAAATTTATGGCT
TTTTTGGAGGCAATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGCGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATCTTCTTGAGAATTTTCATCAGATTTTCGGAAAAGAAAAGTTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGTATGCAGGCCAGCCACTATCGTACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCACACACTGCAAAGTATGTTTATGCTATCGGAATGGGACAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACGGAAGAAGAGATGGAAAAAGTCAATCTTGTTTCAGCTAGTTCTTCACGTTTTGATTTGG
TCAGCCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGCTTAATGCTGCGACGGAACAGTTAGTTATTTCC
ACACCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCACCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGTCGGATTAAAACACTTAGTCCGCAAGACATAGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCAAGCCTTGAAACAGAGGAGTGGGAAGGGCAGAGGGCCTTCTGGACAGTATTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGTGATATTGCTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCCCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TACACAATGTGCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAACACGGGCTCTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAACTAGATTTTGATCAAAAAGTGGACCAGGCCATTCTGCGTACACGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTGGAAATTGATGGCCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTAGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATTAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGTGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGAGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTATACAAACAAGCTGCCATGGACATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACAAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
GCGGCGGTTGGTCAAGGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCCGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.059	100	0.457