Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   HYO64_RS17365 Genome accession   NZ_CP058729
Coordinates   3627678..3628313 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain M164-3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3622678..3633313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYO64_RS17345 - 3622754..3623569 (+) 816 WP_000011163.1 DsbC family protein -
  HYO64_RS17350 - 3623814..3625115 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  HYO64_RS17355 thrC 3625171..3626310 (+) 1140 WP_114153491.1 threonine synthase -
  HYO64_RS17360 pbpG 3626419..3627465 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  HYO64_RS17365 letA 3627678..3628313 (+) 636 WP_000633799.1 response regulator transcription factor GacA Regulator
  HYO64_RS17370 pilS 3628324..3629892 (+) 1569 WP_057065334.1 sensor histidine kinase Regulator
  HYO64_RS17375 - 3629917..3631338 (+) 1422 WP_096641157.1 sigma-54-dependent transcriptional regulator -
  HYO64_RS17380 - 3631342..3632526 (-) 1185 WP_004842752.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=406971 HYO64_RS17365 WP_000633799.1 3627678..3628313(+) (letA) [Acinetobacter baumannii strain M164-3]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=406971 HYO64_RS17365 WP_000633799.1 3627678..3628313(+) (letA) [Acinetobacter baumannii strain M164-3]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55

Multiple sequence alignment