Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FJN15_RS00770 | Genome accession | NZ_CP046670 |
| Coordinates | 171132..171722 (+) | Length | 196 a.a. |
| NCBI ID | WP_012516753.1 | Uniprot ID | F2G3Q0 |
| Organism | Alteromonas mediterranea strain AltCH17 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 166132..176722
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FJN15_RS00755 (FJN15_00755) | - | 166751..167806 (+) | 1056 | WP_157315373.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| FJN15_RS00760 (FJN15_00760) | galK | 167799..168938 (+) | 1140 | WP_157315375.1 | galactokinase | - |
| FJN15_RS00765 (FJN15_00765) | - | 169305..170867 (+) | 1563 | WP_157315377.1 | sodium/sugar symporter | - |
| FJN15_RS00770 (FJN15_00770) | ssb | 171132..171722 (+) | 591 | WP_012516753.1 | single-stranded DNA-binding protein | Machinery gene |
| FJN15_RS00775 (FJN15_00775) | - | 171932..172882 (+) | 951 | WP_157315379.1 | hypothetical protein | - |
| FJN15_RS00780 (FJN15_00780) | - | 172890..173108 (+) | 219 | WP_071968036.1 | hypothetical protein | - |
| FJN15_RS00785 (FJN15_00785) | - | 173144..174430 (+) | 1287 | WP_196772456.1 | alpha/beta hydrolase family protein | - |
| FJN15_RS00790 (FJN15_00790) | - | 174583..176712 (-) | 2130 | WP_157315381.1 | alpha-galactosidase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21299.23 Da Isoelectric Point: 4.9562
>NTDB_id=406561 FJN15_RS00770 WP_012516753.1 171132..171722(+) (ssb) [Alteromonas mediterranea strain AltCH17]
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDKYTTEIIVDQMQMLGGRGGDGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNQSQ
GQGGGYNQAPQGGNPSQPKTPPMAEPDFDFDDDIPF
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMYRRLAEIAGEYLKKGSQIYVE
GKLQTRKWQDQQGQDKYTTEIIVDQMQMLGGRGGDGGGGNGGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNQSQ
GQGGGYNQAPQGGNPSQPKTPPMAEPDFDFDDDIPF
Nucleotide
Download Length: 591 bp
>NTDB_id=406561 FJN15_RS00770 WP_012516753.1 171132..171722(+) (ssb) [Alteromonas mediterranea strain AltCH17]
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTACGTAGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAGCAAGGTCAGGATAAGTACACTACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGCGGTCGCGGCGGTGATGGTGGCGGCGGAAACGGCGGTTACCAGCGTCCTCAAAACAACCAAGGCGGTTATA
ATCAAGCGCCAGCGCAAGGTGGTTACAACCAGGCTCCACAACAAGGTGGAGGCCAGCAAGGCGGCTATAACCAGAGCCAG
GGCCAAGGCGGTGGTTATAATCAAGCGCCGCAGGGCGGTAACCCGTCACAGCCTAAGACTCCGCCTATGGCTGAACCAGA
CTTCGATTTTGACGACGATATTCCGTTCTAA
ATGGCAACGAAAGGCGTTAATAAGGTTATTCTTGTTGGAAACCTTGGCAATGATCCTGAAGTTAGATACATGCCTAACGG
AAACGCCGTTGCGAACTTAAGCCTAGCAACTAGCGAAAGCTGGAAAGACCAACAGGGTCAGGTTCAAGAGCGCACTGAGT
GGCACCGCCTTACAATGTACCGTCGCTTAGCAGAAATTGCCGGAGAGTACCTGAAAAAGGGCTCGCAAATTTACGTAGAA
GGTAAATTGCAAACGCGTAAGTGGCAAGATCAGCAAGGTCAGGATAAGTACACTACTGAAATTATCGTAGACCAAATGCA
AATGCTTGGCGGTCGCGGCGGTGATGGTGGCGGCGGAAACGGCGGTTACCAGCGTCCTCAAAACAACCAAGGCGGTTATA
ATCAAGCGCCAGCGCAAGGTGGTTACAACCAGGCTCCACAACAAGGTGGAGGCCAGCAAGGCGGCTATAACCAGAGCCAG
GGCCAAGGCGGTGGTTATAATCAAGCGCCGCAGGGCGGTAACCCGTCACAGCCTAAGACTCCGCCTATGGCTGAACCAGA
CTTCGATTTTGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
56 |
100 |
0.571 |
| ssb | Vibrio cholerae strain A1552 |
53.731 |
100 |
0.551 |
| ssb | Neisseria meningitidis MC58 |
46.392 |
98.98 |
0.459 |
| ssb | Neisseria gonorrhoeae MS11 |
46.392 |
98.98 |
0.459 |