Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GO593_RS05260 | Genome accession | NZ_CP046654 |
| Coordinates | 1105093..1105674 (-) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1100093..1110674
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO593_RS05250 (GO593_05250) | - | 1102162..1103718 (-) | 1557 | WP_000163911.1 | site-specific integrase | - |
| GO593_RS05255 (GO593_05255) | - | 1103711..1104937 (-) | 1227 | WP_002147669.1 | site-specific integrase | - |
| GO593_RS05260 (GO593_05260) | ssb | 1105093..1105674 (-) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| GO593_RS05265 (GO593_05265) | - | 1105726..1107090 (-) | 1365 | WP_001985116.1 | MFS transporter | - |
| GO593_RS05270 (GO593_05270) | - | 1107237..1108319 (-) | 1083 | WP_000680211.1 | DUF475 domain-containing protein | - |
| GO593_RS05275 (GO593_05275) | tenA | 1108582..1109256 (+) | 675 | WP_000899418.1 | thiaminase II | - |
| GO593_RS05280 (GO593_05280) | - | 1109307..1109648 (-) | 342 | WP_000263327.1 | GlpM family protein | - |
| GO593_RS05285 (GO593_05285) | - | 1109701..1110054 (-) | 354 | WP_000580166.1 | DUF1304 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=406477 GO593_RS05260 WP_001215080.1 1105093..1105674(-) (ssb) [Acinetobacter baumannii strain ATCC 19606]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=406477 GO593_RS05260 WP_001215080.1 1105093..1105674(-) (ssb) [Acinetobacter baumannii strain ATCC 19606]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGGGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGCGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGACTTACCGTTCTAG
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGGGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGCGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGACTTACCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |