Detailed information NTG0406408

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: GPA07_RS03565
• Genome accession: NZ_CP046653
• Coordinates: 691360..692535 (+)
• Length: 391 a.a.
• NCBI ID: WP_008360205.1
• Uniprot ID: A0AAC9NCV1
• Organism: Bacillus sp. ms-22
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 686360..697535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPA07_RS03545 (GPA07_03545)	-	687517..688584 (+)	1068	WP_071168499.1	MraY family glycosyltransferase	-
GPA07_RS03550 (GPA07_03550)	-	688642..689281 (-)	640	Protein_680	IS3 family transposase	-
GPA07_RS03555 (GPA07_03555)	-	689396..690487 (-)	1092	WP_008360210.1	LCP family protein	-
GPA07_RS03560 (GPA07_03560)	-	690472..691140 (-)	669	WP_157292038.1	YigZ family protein	-
GPA07_RS03565 (GPA07_03565)	degS	691360..692535 (+)	1176	WP_008360205.1	sensor histidine kinase	Regulator
GPA07_RS03570 (GPA07_03570)	degU	692600..693289 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
GPA07_RS03575 (GPA07_03575)	-	693502..694344 (+)	843	WP_157292039.1	DegV family protein	-
GPA07_RS03580 (GPA07_03580)	comFA	694464..695843 (+)	1380	WP_145939407.1	DEAD/DEAH box helicase	Machinery gene
GPA07_RS03585 (GPA07_03585)	-	695908..696201 (+)	294	WP_008360197.1	competence protein ComFB	-
GPA07_RS18585 (GPA07_03590)	comFC	696228..696884 (+)	657	WP_008360195.1	ComF family protein	Machinery gene
GPA07_RS03595 (GPA07_03595)	-	696941..697360 (+)	420	WP_008360193.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=406408 GPA07_RS03565 WP_008360205.1 691360..692535(+) (degS) [Bacillus sp. ms-22]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=406408 GPA07_RS03565 WP_008360205.1 691360..692535(+) (degS) [Bacillus sp. ms-22]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATAGGCGAGCAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTTAAACAAATCAAACAGCAAG
TAAATGAAGTAATTGATTTTGGTGATAAACTAGAAGTACATACGAGACATGCTAGAAACCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGTGAAGAAGAAATTCGAGAAGCCTACGAAAAAGCGCATAATCTGCAAGTAGAACTCACTATGAT
CCAGCAGCGTGAAAAGCAGCTGAGGGAAAGAAGAGACGATCTAGAAAGACGATTACTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACACTTGTGAGCCAGATCACGGTCGTCCTCAACTACCTAAACCAAGATTTACGCCAAGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGGGA
AATACATGATGGGCCTGCTCAGATGCTGGCAAATGTAATGATGCGTTCTGAATTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTTAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTAGGTCTCATTCCGACGCTAAGAAAGTACTTAAACACAATTGAAGAGTA
CGATGGGAAAACCAAGATTACGTTCCAGTGCATTGGTGATACAGAAAGCGAAAGAATCGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTA
ACAAAAGACTTTGTGACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCATTCGGGTTACTTGGTATGAAAGAACGCGTTGACTTACTAGAAGGTAAAATGACCATTGACTCAAAAATAGGTCTAG
GGACATTCATTATGATTAGAGTGCCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844