Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   GO596_RS07695 Genome accession   NZ_CP046628
Coordinates   1539158..1540483 (+) Length   441 a.a.
NCBI ID   WP_141348012.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534158..1545483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS07680 (GO596_07680) phoU 1534935..1535588 (+) 654 WP_024344053.1 phosphate signaling complex protein PhoU -
  GO596_RS07685 (GO596_07685) - 1535797..1538340 (+) 2544 WP_157339526.1 M1 family metallopeptidase -
  GO596_RS07690 (GO596_07690) ciaR 1538494..1539168 (+) 675 WP_024344055.1 response regulator transcription factor Regulator
  GO596_RS07695 (GO596_07695) ciaH 1539158..1540483 (+) 1326 WP_141348012.1 sensor histidine kinase Regulator
  GO596_RS07700 (GO596_07700) rpsT 1540566..1540817 (-) 252 WP_004231769.1 30S ribosomal protein S20 -
  GO596_RS07705 (GO596_07705) coaA 1540893..1541813 (-) 921 WP_094140583.1 type I pantothenate kinase -
  GO596_RS07710 (GO596_07710) - 1541927..1542517 (+) 591 WP_024344058.1 class I SAM-dependent methyltransferase -
  GO596_RS07715 (GO596_07715) deoC 1543020..1543685 (+) 666 WP_021142326.1 deoxyribose-phosphate aldolase -
  GO596_RS07720 (GO596_07720) - 1543874..1544929 (+) 1056 WP_080651031.1 BMP family lipoprotein -

Sequence

Protein


Download         Length: 441 a.a.        Molecular weight: 50148.05 Da        Isoelectric Point: 7.5433

>NTDB_id=406258 GO596_RS07695 WP_141348012.1 1539158..1540483(+) (ciaH) [Streptococcus equinus strain CNU 77-23]
MLNNIQKKISTGTFSHFFHFFAVFTGIFVIMTIIILQIMRYGLYSSVDTTLQNAANNASDYVTRTMERSDSIQSDNTINE
SGKNKSSSNDGLSNVSVLLYDCNGKIVNALDAFIQFGSLTTSVNDDKIGEISEEKMTTIFGQTEKYHVLTVRVYSSDYPT
IQYATFLISVRQLDEANERYVTITITVMVIFWIISILASVYLANWTRKPILESYEKQKRFVENASHELRTPLAVLQNRLE
SLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEEIHPSTFNEIFENYQMIAHENNKKFTAHNLA
NRPIKSDKTLLKQLMTILFDNAIKYTGDDGVIEFTIKTTERQTILTIADNGPGVSDADKQKIFDRFYRVDKARTRQQGGF
GLGLSLAKQIVDALKGDIQVKDNKPKGTIFEVRFNRHNFGK

Nucleotide


Download         Length: 1326 bp        

>NTDB_id=406258 GO596_RS07695 WP_141348012.1 1539158..1540483(+) (ciaH) [Streptococcus equinus strain CNU 77-23]
ATGCTGAATAATATACAGAAAAAAATATCAACGGGGACTTTCTCACACTTTTTCCATTTTTTTGCTGTGTTTACAGGGAT
TTTCGTCATTATGACAATTATTATCCTGCAAATCATGCGATATGGTTTATACTCTTCTGTCGACACGACGTTACAAAATG
CTGCAAATAATGCCAGTGATTACGTTACGAGAACGATGGAGAGAAGTGATTCGATTCAATCTGATAATACGATTAATGAG
TCAGGAAAAAATAAATCAAGTTCAAATGATGGATTGAGTAATGTTAGTGTCCTTTTGTATGATTGCAACGGTAAAATAGT
TAATGCTTTAGATGCCTTTATTCAATTTGGATCACTAACGACGAGTGTTAATGATGATAAAATCGGTGAAATAAGCGAAG
AGAAGATGACTACGATTTTCGGTCAAACTGAAAAGTATCACGTCTTGACTGTCAGAGTTTATAGTAGTGATTATCCAACA
ATTCAATACGCAACCTTTCTAATTAGTGTTCGTCAGCTTGACGAGGCAAATGAAAGATATGTGACAATTACTATTACAGT
TATGGTTATCTTTTGGATTATTTCAATTTTAGCGAGTGTTTATCTTGCAAACTGGACTCGTAAACCGATTCTTGAAAGTT
ATGAGAAACAGAAACGCTTTGTTGAGAATGCCAGTCATGAGTTGAGAACGCCGCTTGCTGTTTTGCAAAATCGTCTTGAA
AGTTTGTTTAGACGTCCAGATGCAACAATTTTAGATAATAGCGAAAGTATTGCTGCAAGTCTTGATGAAGTGCGAAATAT
GCGTATTCTGACAACAAATCTTTTAAATCTTGCTAGACGTGATGATGGTTTGAAAGTTGAATTGGAAGAGATTCATCCAT
CAACCTTTAACGAGATTTTTGAAAATTATCAGATGATTGCTCACGAAAATAATAAAAAGTTTACTGCACACAATTTAGCT
AATCGTCCGATAAAATCAGATAAGACTCTTTTGAAACAACTAATGACTATTTTATTTGATAATGCCATTAAGTACACTGG
TGATGATGGCGTTATTGAATTTACCATTAAAACAACAGAACGCCAAACTATTTTAACTATTGCTGATAACGGACCTGGTG
TTAGTGATGCCGATAAGCAGAAGATTTTTGATCGCTTTTACCGTGTCGACAAGGCAAGGACGCGTCAACAAGGTGGATTT
GGTTTGGGTTTGTCTCTAGCGAAGCAAATTGTTGATGCTTTGAAGGGTGATATTCAGGTTAAAGATAACAAACCAAAAGG
AACTATTTTTGAAGTTCGTTTCAACAGACATAATTTTGGTAAATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(217-283)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(327-434)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.447

98.413

0.585
  ciaH Streptococcus pneumoniae Rx1

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae D39

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae R6

51.835

98.866

0.512
  ciaH Streptococcus pneumoniae TIGR4

51.835

98.866

0.512

Multiple sequence alignment