Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GOQ05_RS17945 | Genome accession | NZ_CP046552 |
| Coordinates | 3719606..3720187 (-) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain 19WIARLN021_full | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3714606..3725187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ05_RS17930 (GOQ05_17795) | - | 3714918..3715691 (-) | 774 | WP_252720347.1 | cupin domain-containing protein | - |
| GOQ05_RS17935 (GOQ05_17800) | - | 3715742..3717856 (-) | 2115 | WP_000120453.1 | peptidase domain-containing ABC transporter | - |
| GOQ05_RS17940 (GOQ05_17805) | - | 3717858..3719033 (-) | 1176 | WP_227503846.1 | HlyD family secretion protein | - |
| GOQ05_RS17945 (GOQ05_17810) | ssb | 3719606..3720187 (-) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| GOQ05_RS17950 (GOQ05_17815) | - | 3720239..3721603 (-) | 1365 | WP_304505997.1 | MFS transporter | - |
| GOQ05_RS17955 (GOQ05_17820) | - | 3721751..3722833 (-) | 1083 | WP_000680213.1 | DUF475 domain-containing protein | - |
| GOQ05_RS17960 (GOQ05_17825) | tenA | 3723096..3723770 (+) | 675 | WP_000899418.1 | thiaminase II | - |
| GOQ05_RS17965 (GOQ05_17830) | - | 3723820..3724161 (-) | 342 | WP_000263324.1 | GlpM family protein | - |
| GOQ05_RS17970 (GOQ05_17835) | - | 3724214..3724567 (-) | 354 | WP_000901439.1 | DUF1304 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=405432 GOQ05_RS17945 WP_001215080.1 3719606..3720187(-) (ssb) [Acinetobacter baumannii strain 19WIARLN021_full]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=405432 GOQ05_RS17945 WP_001215080.1 3719606..3720187(-) (ssb) [Acinetobacter baumannii strain 19WIARLN021_full]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGTTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGTTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |