Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GOQ06_RS18015 | Genome accession | NZ_CP046546 |
| Coordinates | 3743045..3743626 (-) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain 19WIARLN023_full | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3738045..3748626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ06_RS18000 (GOQ06_17825) | - | 3738357..3739130 (-) | 774 | WP_252720347.1 | cupin domain-containing protein | - |
| GOQ06_RS18005 (GOQ06_17830) | - | 3739181..3741295 (-) | 2115 | WP_000120453.1 | peptidase domain-containing ABC transporter | - |
| GOQ06_RS18010 (GOQ06_17835) | - | 3741297..3742472 (-) | 1176 | WP_227503846.1 | HlyD family secretion protein | - |
| GOQ06_RS18015 (GOQ06_17840) | ssb | 3743045..3743626 (-) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| GOQ06_RS18020 (GOQ06_17845) | - | 3743678..3745042 (-) | 1365 | WP_031949855.1 | MFS transporter | - |
| GOQ06_RS18025 (GOQ06_17850) | - | 3745190..3746272 (-) | 1083 | WP_000680213.1 | DUF475 domain-containing protein | - |
| GOQ06_RS18030 (GOQ06_17855) | tenA | 3746535..3747209 (+) | 675 | WP_000899418.1 | thiaminase II | - |
| GOQ06_RS18035 (GOQ06_17860) | - | 3747259..3747600 (-) | 342 | WP_000263324.1 | GlpM family protein | - |
| GOQ06_RS18040 (GOQ06_17865) | - | 3747653..3748006 (-) | 354 | WP_000901439.1 | DUF1304 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=405334 GOQ06_RS18015 WP_001215080.1 3743045..3743626(-) (ssb) [Acinetobacter baumannii strain 19WIARLN023_full]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=405334 GOQ06_RS18015 WP_001215080.1 3743045..3743626(-) (ssb) [Acinetobacter baumannii strain 19WIARLN023_full]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGTTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGTTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |