Detailed information NTG0405249

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: GOD87_RS15975
• Genome accession: NZ_CP046536
• Coordinates: 3405659..3406141 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XL380
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3400659..3411141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOD87_RS15940 (GOD87_15940)	-	3400766..3401800 (+)	1035	WP_057093625.1	lipase secretion chaperone	-
GOD87_RS15945 (GOD87_15945)	-	3401915..3402856 (+)	942	WP_085943440.1	lipase family alpha/beta hydrolase	-
GOD87_RS15950 (GOD87_15950)	rplS	3402909..3403277 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
GOD87_RS15955 (GOD87_15955)	trmD	3403485..3404225 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GOD87_RS15960 (GOD87_15960)	rimM	3404271..3404819 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
GOD87_RS15965 (GOD87_15965)	rpsP	3404839..3405090 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
GOD87_RS15970 (GOD87_15970)	pilE	3405237..3405662 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
GOD87_RS15975 (GOD87_15975)	pilY2	3405659..3406141 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
GOD87_RS15980 (GOD87_15980)	pilY1	3406154..3410008 (-)	3855	WP_000768965.1	PilC/PilY family type IV pilus protein	Machinery gene
GOD87_RS15985 (GOD87_15985)	pilX	3410020..3410838 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=405249 GOD87_RS15975 WP_001046417.1 3405659..3406141(-) (pilY2) [Acinetobacter baumannii strain XL380]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=405249 GOD87_RS15975 WP_001046417.1 3405659..3406141(-) (pilY2) [Acinetobacter baumannii strain XL380]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444