Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GOD87_RS15970 | Genome accession | NZ_CP046536 |
| Coordinates | 3405237..3405662 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain XL380 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3400237..3410662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOD87_RS15940 (GOD87_15940) | - | 3400766..3401800 (+) | 1035 | WP_057093625.1 | lipase secretion chaperone | - |
| GOD87_RS15945 (GOD87_15945) | - | 3401915..3402856 (+) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| GOD87_RS15950 (GOD87_15950) | rplS | 3402909..3403277 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| GOD87_RS15955 (GOD87_15955) | trmD | 3403485..3404225 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GOD87_RS15960 (GOD87_15960) | rimM | 3404271..3404819 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| GOD87_RS15965 (GOD87_15965) | rpsP | 3404839..3405090 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| GOD87_RS15970 (GOD87_15970) | pilE | 3405237..3405662 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| GOD87_RS15975 (GOD87_15975) | pilY2 | 3405659..3406141 (-) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| GOD87_RS15980 (GOD87_15980) | pilY1 | 3406154..3410008 (-) | 3855 | WP_000768965.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=405248 GOD87_RS15970 WP_000788342.1 3405237..3405662(-) (pilE) [Acinetobacter baumannii strain XL380]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=405248 GOD87_RS15970 WP_000788342.1 3405237..3405662(-) (pilE) [Acinetobacter baumannii strain XL380]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |