Detailed information NTG0405007

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: B18_RS07830
• Genome accession: NZ_CP058332
• Coordinates: 1690854..1691879 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain B18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1685854..1696879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B18_RS07805 (B18_07785)	aroE	1686056..1686880 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
B18_RS07810 (B18_07790)	hemF	1686938..1687855 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
B18_RS07815 (B18_07795)	-	1688046..1689023 (+)	978	WP_179118816.1	NADPH:quinone reductase	-
B18_RS07820 (B18_07800)	-	1689033..1689590 (-)	558	WP_016561457.1	Sua5/YciO/YrdC/YwlC family protein	-
B18_RS07825 (B18_07805)	dprA	1689631..1690719 (-)	1089	WP_031640954.1	DNA-processing protein DprA	Machinery gene
B18_RS07830 (B18_07810)	tsaP	1690854..1691879 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
B18_RS07835 (B18_07815)	def	1692018..1692524 (+)	507	WP_003107059.1	peptide deformylase	-
B18_RS07840 (B18_07820)	fmt	1692579..1693523 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
B18_RS07845 (B18_07825)	rsmB	1693520..1694824 (+)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
B18_RS07850 (B18_07830)	trkA	1694852..1696225 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
B18_RS07855 (B18_07835)	-	1696374..1696691 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=405007 B18_RS07830 WP_003097294.1 1690854..1691879(-) (tsaP) [Pseudomonas aeruginosa strain B18]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=405007 B18_RS07830 WP_003097294.1 1690854..1691879(-) (tsaP) [Pseudomonas aeruginosa strain B18]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393