Detailed information NTG0404109

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: HWV68_RS14970
• Genome accession: NZ_CP058242
• Coordinates: 2836171..2836776 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SP1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2831171..2841776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWV68_RS14940 (HWV68_14935)	-	2831984..2832373 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
HWV68_RS14945 (HWV68_14940)	yajC	2832430..2832696 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
HWV68_RS14950 (HWV68_14945)	tgt	2832733..2833878 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
HWV68_RS14955 (HWV68_14950)	queA	2833905..2834933 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
HWV68_RS14960 (HWV68_14955)	yrzS	2834963..2835163 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
HWV68_RS14965 (HWV68_14960)	ruvB	2835156..2836160 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
HWV68_RS14970 (HWV68_14965)	ruvA	2836171..2836776 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
HWV68_RS14975 (HWV68_14970)	bofC	2836915..2837427 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
HWV68_RS14980 (HWV68_14975)	csbX	2837475..2838782 (-)	1308	WP_003246197.1	MFS transporter	-
HWV68_RS14985 (HWV68_14980)	iolG	2838853..2839878 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
HWV68_RS14990 (HWV68_14985)	yrzF	2840116..2840763 (+)	648	WP_003246159.1	phosphotransferase	-
HWV68_RS14995 (HWV68_14990)	-	2840809..2840931 (-)	123	WP_003229707.1	hypothetical protein	-
HWV68_RS15000 (HWV68_14995)	yrzH	2841016..2841306 (+)	291	WP_003246047.1	DUF5412 family protein	-
HWV68_RS15005 (HWV68_15000)	-	2841313..2841453 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=404109 HWV68_RS14970 WP_003229717.1 2836171..2836776(-) (ruvA) [Bacillus subtilis strain SP1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=404109 HWV68_RS14970 WP_003229717.1 2836171..2836776(-) (ruvA) [Bacillus subtilis strain SP1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408