Detailed information NTG0402867

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOC34_RS23150
• Genome accession: NZ_CP046343
• Coordinates: 1980801..1981943 (-)
• Length: 380 a.a.
• NCBI ID: WP_006416170.1
• Uniprot ID: A0A0H3KRG3
• Organism: Burkholderia multivorans strain FDAARGOS_726
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1975801..1986943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC34_RS23130 (FOC34_23125)	-	1976382..1976765 (+)	384	WP_006398232.1	nuclear transport factor 2 family protein	-
FOC34_RS23135 (FOC34_23130)	leuA	1976901..1978547 (-)	1647	WP_155819551.1	2-isopropylmalate synthase	-
FOC34_RS23140 (FOC34_23135)	ybiB	1978941..1979912 (-)	972	WP_006398234.1	DNA-binding protein YbiB	-
FOC34_RS23145 (FOC34_23140)	maiA	1980086..1980730 (+)	645	WP_039220123.1	maleylacetoacetate isomerase	-
FOC34_RS23150 (FOC34_23145)	pilA	1980801..1981943 (-)	1143	WP_006416170.1	signal recognition particle-docking protein FtsY	Machinery gene
FOC34_RS23155 (FOC34_23150)	rsmD	1982157..1982771 (+)	615	WP_155819552.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOC34_RS23160 (FOC34_23155)	coaD	1982883..1983380 (+)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
FOC34_RS23165 (FOC34_23160)	-	1983702..1983965 (+)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOC34_RS23170 (FOC34_23165)	hisC	1984034..1985101 (-)	1068	WP_155819553.1	histidinol-phosphate transaminase	-
FOC34_RS23175 (FOC34_23170)	pth	1985237..1985836 (-)	600	WP_155819554.1	aminoacyl-tRNA hydrolase	-
FOC34_RS23180 (FOC34_23175)	-	1985945..1986550 (-)	606	WP_155819555.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40336.19 Da
• Isoelectric Point: 4.9462

>NTDB_id=402867 FOC34_RS23150 WP_006416170.1 1980801..1981943(-) (pilA) [Burkholderia multivorans strain FDAARGOS_726]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=402867 FOC34_RS23150 WP_006416170.1 1980801..1981943(-) (pilA) [Burkholderia multivorans strain FDAARGOS_726]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCCGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTGA
TGACGGTCACGCCGAGCGACAACGGTCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACCGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCCGGCGTCGACGCGACCGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGGGTGGGCCGCCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAACTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTCAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCCGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAGGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

3D structure

• AlphaFold DB: A0A0H3KRG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589