Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOB91_RS06745 Genome accession   NZ_CP046328
Coordinates   1368877..1369641 (+) Length   254 a.a.
NCBI ID   WP_012131082.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1363877..1374641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS06715 (FOB91_06715) comE/comE2 1364366..1365133 (-) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator
  FOB91_RS06720 (FOB91_06720) comD/comD1 1365130..1366491 (-) 1362 WP_012131078.1 competence system sensor histidine kinase ComD Regulator
  FOB91_RS06725 (FOB91_06725) comC/comC1 1366507..1366659 (-) 153 WP_012131079.1 bacteriocin Regulator
  FOB91_RS06735 (FOB91_06735) rlmH 1366945..1367424 (-) 480 WP_012131080.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOB91_RS06740 (FOB91_06740) htrA 1367618..1368811 (+) 1194 WP_012131081.1 S1C family serine protease Regulator
  FOB91_RS06745 (FOB91_06745) spo0J 1368877..1369641 (+) 765 WP_012131082.1 ParB/RepB/Spo0J family partition protein Regulator
  FOB91_RS06750 (FOB91_06750) dnaA 1369844..1371196 (+) 1353 WP_011999558.1 chromosomal replication initiator protein DnaA -
  FOB91_RS06755 (FOB91_06755) dnaN 1371352..1372488 (+) 1137 WP_011999559.1 DNA polymerase III subunit beta -
  FOB91_RS06760 (FOB91_06760) - 1372488..1372691 (+) 204 WP_008808039.1 DUF951 domain-containing protein -
  FOB91_RS06765 (FOB91_06765) - 1372701..1373219 (-) 519 WP_011999560.1 YehR family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29310.99 Da        Isoelectric Point: 9.3146

>NTDB_id=402707 FOB91_RS06745 WP_012131082.1 1368877..1369641(+) (spo0J) [Streptococcus gordonii strain FDAARGOS_683]
MENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGERRFRAAKIAGLTEIPALVKS
LSDDEMMKQAIIENLQREDLNPIEEAESYQNLIYKGLTHDEIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGHISQAHA
RLLIKLKEKDQRKWLENIISSDISVRKLEKLLQTSPIKSKSENVQKIFIEEEEENLKKLLGVEVKISLSKKQTGKISISF
SNQEEYERIINSLK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=402707 FOB91_RS06745 WP_012131082.1 1368877..1369641(+) (spo0J) [Streptococcus gordonii strain FDAARGOS_683]
ATGGAAAATTATCAATATATTTTAATTAAAGATATTCACACCAATCCCTATCAACCAAGAAAAGATTTTTCAATAGAGAA
ATTAAACGAGTTAGCAAATTCTATTAAAGAAAACGGATTAATTCAGCCTATTATTGTTAGGAAATCATCTATCATTGGAT
ACGAACTTTTAGCTGGGGAAAGAAGATTTAGGGCAGCTAAAATAGCAGGTTTAACTGAAATTCCTGCCTTAGTAAAATCA
CTAAGCGATGATGAAATGATGAAGCAGGCTATTATTGAAAATCTTCAAAGAGAGGATCTCAATCCAATAGAAGAAGCTGA
ATCTTATCAGAATCTTATTTACAAGGGATTAACGCATGATGAAATCGCTCAAATCATGGGAAAATCGAGACCTTATATTA
CTAATCTTGTTCGCTTGCTACAGCTACCTGATTTTGTCTTAAAAGCTGTAAAAGAGGGTCATATTTCTCAAGCTCATGCT
CGGTTACTAATAAAACTCAAGGAAAAAGACCAGAGAAAATGGCTTGAAAATATTATTTCTTCAGATATTTCTGTTAGAAA
ATTAGAAAAATTATTACAGACTTCTCCTATTAAGTCCAAGTCTGAAAATGTCCAAAAAATTTTTATAGAGGAAGAAGAAG
AAAACCTAAAGAAATTATTGGGAGTCGAAGTAAAGATTAGTCTCTCTAAGAAACAAACTGGCAAAATCTCAATTTCTTTT
TCTAATCAGGAAGAATATGAAAGAATTATTAACAGTCTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.937

100

0.539

Multiple sequence alignment