Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOB21_RS10840 | Genome accession | NZ_CP046296 |
| Coordinates | 1982653..1983240 (+) | Length | 195 a.a. |
| NCBI ID | WP_004281391.1 | Uniprot ID | A0A2K8UM26 |
| Organism | Acinetobacter lwoffii strain FDAARGOS_552 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1977653..1988240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB21_RS10820 (FOB21_10820) | - | 1978513..1978881 (-) | 369 | WP_005105375.1 | hypothetical protein | - |
| FOB21_RS10825 (FOB21_10825) | tenA | 1979101..1979772 (-) | 672 | WP_155861678.1 | thiaminase II | - |
| FOB21_RS10830 (FOB21_10830) | - | 1979995..1981083 (+) | 1089 | WP_004647275.1 | DUF475 domain-containing protein | - |
| FOB21_RS10835 (FOB21_10835) | - | 1981237..1982601 (+) | 1365 | WP_017398000.1 | MFS transporter | - |
| FOB21_RS10840 (FOB21_10840) | ssb | 1982653..1983240 (+) | 588 | WP_004281391.1 | single-stranded DNA-binding protein | Machinery gene |
| FOB21_RS10845 (FOB21_10845) | ahpC | 1983549..1984112 (+) | 564 | WP_005105379.1 | alkyl hydroperoxide reductase subunit C | - |
| FOB21_RS10850 (FOB21_10850) | - | 1984734..1986041 (+) | 1308 | WP_005105380.1 | FAD-dependent oxidoreductase | - |
| FOB21_RS10855 (FOB21_10855) | - | 1986045..1986893 (+) | 849 | WP_155861679.1 | SAM-dependent methyltransferase | - |
| FOB21_RS10865 (FOB21_10865) | - | 1987249..1987476 (-) | 228 | WP_004647282.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 21359.06 Da Isoelectric Point: 6.4820
>NTDB_id=402413 FOB21_RS10840 WP_004281391.1 1982653..1983240(+) (ssb) [Acinetobacter lwoffii strain FDAARGOS_552]
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSSRPQNDQGESSFNQPRFNNNNQANNNQGGYGNNPQSGYGSAPQQGGFNNN
QGGGYGNNNPSGFAPKSAPAPTAAPAADLDDDLPF
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSSRPQNDQGESSFNQPRFNNNNQANNNQGGYGNNPQSGYGSAPQQGGFNNN
QGGGYGNNNPSGFAPKSAPAPTAAPAADLDDDLPF
Nucleotide
Download Length: 588 bp
>NTDB_id=402413 FOB21_RS10840 WP_004281391.1 1982653..1983240(+) (ssb) [Acinetobacter lwoffii strain FDAARGOS_552]
ATGCGTGGTGTAAATAAAGTTATTTTAGTGGGTACTTTGGGTAAAGATCCGGAAACCAAAACTTTTGCAAATGGTGGCTC
TCTCACTCAATTCTCGATCGCAACCAGCGATTCGTGGACAGATAAAAGTACCGGTGAACGTAAAGAACAAACGGAATGGC
ACCGTATCGTGTTGCATAACCGTTTAGGTGAAATTGCGCAGCAATATCTTCGTAAAGGTTCAAAAGTATATATTGAAGGT
TCATTACGTACCCGTCAGTGGACTGACCAGAATGGTCAGGAACGCTATACGACGGAAATTCGTGGTGAACAAATGCAGAT
GCTAGACTCTAGCCGTCCTCAAAATGATCAGGGCGAGAGCAGCTTTAACCAGCCACGCTTTAATAACAATAATCAGGCGA
ACAACAACCAGGGCGGTTATGGCAATAACCCGCAATCAGGTTATGGTTCAGCACCACAGCAAGGCGGTTTTAACAACAAC
CAGGGCGGCGGTTATGGCAACAATAACCCGAGTGGTTTTGCGCCAAAATCTGCACCTGCTCCAACAGCAGCACCTGCAGC
AGATCTAGATGATGACCTTCCATTTTGA
ATGCGTGGTGTAAATAAAGTTATTTTAGTGGGTACTTTGGGTAAAGATCCGGAAACCAAAACTTTTGCAAATGGTGGCTC
TCTCACTCAATTCTCGATCGCAACCAGCGATTCGTGGACAGATAAAAGTACCGGTGAACGTAAAGAACAAACGGAATGGC
ACCGTATCGTGTTGCATAACCGTTTAGGTGAAATTGCGCAGCAATATCTTCGTAAAGGTTCAAAAGTATATATTGAAGGT
TCATTACGTACCCGTCAGTGGACTGACCAGAATGGTCAGGAACGCTATACGACGGAAATTCGTGGTGAACAAATGCAGAT
GCTAGACTCTAGCCGTCCTCAAAATGATCAGGGCGAGAGCAGCTTTAACCAGCCACGCTTTAATAACAATAATCAGGCGA
ACAACAACCAGGGCGGTTATGGCAATAACCCGCAATCAGGTTATGGTTCAGCACCACAGCAAGGCGGTTTTAACAACAAC
CAGGGCGGCGGTTATGGCAACAATAACCCGAGTGGTTTTGCGCCAAAATCTGCACCTGCTCCAACAGCAGCACCTGCAGC
AGATCTAGATGATGACCTTCCATTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.759 |
100 |
0.528 |
| ssb | Vibrio cholerae strain A1552 |
41.206 |
100 |
0.421 |
| ssb | Neisseria meningitidis MC58 |
37.5 |
98.462 |
0.369 |
| ssb | Neisseria gonorrhoeae MS11 |
37.5 |
98.462 |
0.369 |