Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   FOB21_RS08705 Genome accession   NZ_CP046296
Coordinates   1539928..1541067 (+) Length   379 a.a.
NCBI ID   WP_005249630.1    Uniprot ID   N9NVS1
Organism   Acinetobacter lwoffii strain FDAARGOS_552     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1534928..1546067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB21_RS08685 (FOB21_08685) - 1535403..1537490 (-) 2088 WP_005249632.1 TonB-dependent copper receptor -
  FOB21_RS08690 (FOB21_08690) - 1537563..1537973 (-) 411 WP_004644876.1 DUF2946 family protein -
  FOB21_RS08695 (FOB21_08695) def 1538066..1538596 (-) 531 WP_004644875.1 peptide deformylase -
  FOB21_RS08700 (FOB21_08700) tsaP 1538717..1539871 (+) 1155 WP_004732589.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FOB21_RS08705 (FOB21_08705) dprA 1539928..1541067 (+) 1140 WP_005249630.1 DNA-processing protein DprA Machinery gene
  FOB21_RS08710 (FOB21_08710) - 1541109..1541678 (+) 570 WP_005249628.1 L-threonylcarbamoyladenylate synthase -
  FOB21_RS08715 (FOB21_08715) - 1542112..1543008 (-) 897 WP_005265470.1 DMT family transporter -
  FOB21_RS08720 (FOB21_08720) - 1543199..1543744 (+) 546 WP_005249624.1 glutathione peroxidase -
  FOB21_RS08725 (FOB21_08725) - 1544075..1544674 (+) 600 WP_005108413.1 hypothetical protein -
  FOB21_RS08730 (FOB21_08730) - 1544816..1545811 (+) 996 WP_005265469.1 pirin family protein -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42572.53 Da        Isoelectric Point: 6.5744

>NTDB_id=402411 FOB21_RS08705 WP_005249630.1 1539928..1541067(+) (dprA) [Acinetobacter lwoffii strain FDAARGOS_552]
MLNPLSRAQLETITLWYLVQHSLSSFYKISQHYAELANAIQQDQVPVWQALGIHVNHVQRLKELHLPEAQQKFQRCLQQI
QQDSDFILLHSDPHYPQQLHPYVDKPPIIFGQGRPDTLLQAQIAIVGSRKPSPHGRQVAYDFAFYLSEQGFYINSGLAHG
IDEAAHRAALQHQGTIAVMATGLDQTYPAQHQSLRQQIIEHGGAVISEFLPDTLPLQHHFPRRNRMVSGLSLGVIVAEAA
LKSGSLITAKLAAEQGKTVFAIPGHIYSEHHQGCHQLIREGAILIDHPQQVIEELALATQWQAMENTTKMEVTEAEPQQI
PPHLLSLYNQLDWVGQSLDQLGTQVQQEVSALTSQLMELELLGFCTQQAGLYLRCRILK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=402411 FOB21_RS08705 WP_005249630.1 1539928..1541067(+) (dprA) [Acinetobacter lwoffii strain FDAARGOS_552]
ATGCTGAACCCGTTATCACGCGCGCAACTGGAAACAATTACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGTTTTTA
TAAAATCAGTCAACACTATGCCGAACTGGCCAATGCCATTCAGCAGGATCAGGTACCCGTCTGGCAGGCACTCGGTATTC
ATGTCAATCATGTGCAGCGCTTAAAAGAGTTACACCTCCCAGAAGCGCAACAGAAATTTCAGCGTTGTCTGCAACAGATC
CAGCAGGATAGCGATTTTATTTTATTGCATAGCGATCCGCATTACCCGCAGCAGTTGCATCCTTATGTAGATAAACCACC
GATCATTTTTGGTCAAGGTCGACCTGATACCCTGCTTCAGGCACAGATTGCAATTGTGGGCAGTCGCAAGCCGAGTCCGC
ATGGCCGGCAAGTGGCTTATGATTTTGCCTTTTATTTGAGTGAACAGGGTTTCTATATCAATAGCGGTCTGGCACACGGC
ATTGATGAAGCGGCACATCGGGCTGCCCTACAGCATCAAGGCACGATTGCGGTGATGGCCACCGGACTGGATCAAACCTA
TCCAGCACAGCATCAGTCACTGCGCCAGCAAATTATTGAACATGGCGGTGCCGTCATCAGCGAATTTCTGCCAGATACCC
TTCCTCTGCAACACCATTTTCCACGGCGCAACCGAATGGTCAGTGGTTTAAGTCTGGGCGTGATTGTGGCAGAAGCGGCA
TTAAAAAGTGGTTCTCTCATTACGGCCAAGCTGGCAGCCGAACAAGGCAAAACCGTGTTTGCCATTCCGGGACATATTTA
CAGTGAGCATCATCAGGGCTGTCACCAACTGATTCGTGAGGGTGCGATTCTGATTGATCACCCACAGCAGGTCATCGAAG
AACTGGCACTGGCGACGCAATGGCAAGCGATGGAAAACACCACCAAAATGGAAGTTACTGAAGCAGAACCTCAGCAGATT
CCGCCACATCTGCTCAGTCTTTATAATCAACTGGACTGGGTGGGACAGAGTCTGGATCAGCTGGGGACACAGGTACAGCA
AGAAGTGTCTGCGCTGACCAGTCAACTGATGGAGCTGGAGTTACTCGGTTTTTGTACCCAGCAAGCCGGCCTGTATCTAC
GTTGTCGGATTCTCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9NVS1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.564

99.208

0.631

  dprA Acinetobacter baumannii D1279779

62.766

99.208

0.623

  dprA Acinetobacter baylyi ADP1

59.055

100

0.594

  dprA Vibrio cholerae strain A1552

41.742

87.863

0.367


Multiple sequence alignment