Detailed information NTG0401495

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: HUK78_RS00100
• Genome accession: NZ_CP054794
• Coordinates: 21498..22523 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain A0002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16498..27523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUK78_RS00075 (HUK78_00075)	-	16686..17003 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
HUK78_RS00080 (HUK78_00080)	trkA	17152..18525 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
HUK78_RS00085 (HUK78_00085)	rsmB	18553..19857 (-)	1305	WP_003107055.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
HUK78_RS00090 (HUK78_00090)	fmt	19854..20798 (-)	945	WP_096314408.1	methionyl-tRNA formyltransferase	-
HUK78_RS00095 (HUK78_00095)	def	20853..21359 (-)	507	WP_003107059.1	peptide deformylase	-
HUK78_RS00100 (HUK78_00100)	tsaP	21498..22523 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
HUK78_RS00105 (HUK78_00105)	dprA	22658..23746 (+)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
HUK78_RS00110 (HUK78_00110)	-	23787..24344 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
HUK78_RS00115 (HUK78_00115)	-	24354..25331 (-)	978	WP_058148998.1	NADPH:quinone reductase	-
HUK78_RS00120 (HUK78_00120)	hemF	25522..26439 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
HUK78_RS00125 (HUK78_00125)	aroE	26497..27321 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=401495 HUK78_RS00100 WP_003097294.1 21498..22523(+) (tsaP) [Pseudomonas aeruginosa strain A0002]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=401495 HUK78_RS00100 WP_003097294.1 21498..22523(+) (tsaP) [Pseudomonas aeruginosa strain A0002]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393