Detailed information NTG0401129

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: GJV39_RS00385
• Genome accession: NZ_CP046114
• Coordinates: 86360..87487 (-)
• Length: 375 a.a.
• NCBI ID: WP_021110189.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SCW0912
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 81360..92487

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV39_RS00370 (GJV39_00370)	-	83697..84485 (-)	789	WP_010787335.1	heme ABC transporter ATP-binding protein	-
GJV39_RS00375 (GJV39_00375)	-	84485..85471 (-)	987	WP_021110188.1	FecCD family ABC transporter permease	-
GJV39_RS00380 (GJV39_00380)	-	85471..86307 (-)	837	WP_010787337.1	heme/hemin ABC transporter substrate-binding protein	-
GJV39_RS00385 (GJV39_00385)	dprA	86360..87487 (-)	1128	WP_021110189.1	DNA-processing protein DprA	Machinery gene
GJV39_RS00390 (GJV39_00390)	-	87512..88330 (-)	819	WP_021110190.1	Bro-N domain-containing protein	-
GJV39_RS00395 (GJV39_00395)	def	88548..89060 (+)	513	WP_005712670.1	peptide deformylase	-
GJV39_RS00400 (GJV39_00400)	rfaD	89072..89998 (+)	927	WP_021110191.1	ADP-glyceromanno-heptose 6-epimerase	-
GJV39_RS11930	-	90090..90233 (+)	144	WP_005712666.1	hypothetical protein	-
GJV39_RS00405 (GJV39_00405)	-	90193..90498 (+)	306	WP_021110192.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41684.66 Da
• Isoelectric Point: 5.2425

>NTDB_id=401129 GJV39_RS00385 WP_021110189.1 86360..87487(-) (dprA) [Glaesserella parasuis strain SCW0912]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKIALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQQILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAAN
ENGITIAVLGSGLDQVYPARHKKLAEQIVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENVEDILDAIAWQRQSVHIQPSLFDTKPKQAVKSEPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETALIELLSLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=401129 GJV39_RS00385 WP_021110189.1 86360..87487(-) (dprA) [Glaesserella parasuis strain SCW0912]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAATCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGCGTTACAATGGGCAGAACAGGATCAGCAACAGATTTTAACTTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCCATCGTTGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGCCAAT
GAAAACGGGATTACTATTGCGGTTCTAGGCAGTGGGCTAGACCAAGTCTATCCTGCTCGCCACAAAAAACTTGCGGAACA
AATCGTTGATACAAGCGGTGCGTTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTAGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGCTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCGAACTCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTGCTGGTTGAAAATGTTGAAGATATTTTAGATGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGAACCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATTAGCATTGATGATCTTGCCAAAGCAACGGATAT
GGCGGTAGAAACCGCATTGATTGAGCTGTTGAGTTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

• DprA winged helix domain (DprA_WH) (313-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	98.4	100	0.984
dprA	Haemophilus influenzae Rd KW20	52.647	90.667	0.477
dprA	Vibrio campbellii strain DS40M4	46.917	99.467	0.467
dprA	Vibrio cholerae strain A1552	44.149	100	0.443
dprA	Legionella pneumophila strain ERS1305867	39.683	100	0.4