Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SGGBAA2069_RS08305 Genome accession   NC_015215
Coordinates   1669742..1670743 (-) Length   333 a.a.
NCBI ID   WP_009854678.1    Uniprot ID   A0A139R5I1
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1664742..1675743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS08290 (SGGBAA2069_c16070) thrS 1665015..1666961 (-) 1947 WP_012962255.1 threonine--tRNA ligase -
  SGGBAA2069_RS08295 (SGGBAA2069_c16080) - 1667312..1668646 (-) 1335 WP_009854676.1 glycosyltransferase family 4 protein -
  SGGBAA2069_RS08300 (SGGBAA2069_c16090) - 1668648..1669646 (-) 999 WP_012962256.1 glycosyltransferase family 4 protein -
  SGGBAA2069_RS08305 (SGGBAA2069_c16100) ccpA 1669742..1670743 (-) 1002 WP_009854678.1 catabolite control protein A Regulator
  SGGBAA2069_RS08310 (SGGBAA2069_c16110) - 1671071..1672156 (+) 1086 WP_012962257.1 M24 family metallopeptidase -
  SGGBAA2069_RS08315 (SGGBAA2069_c16120) - 1672190..1672516 (-) 327 WP_009854680.1 DMT family transporter -
  SGGBAA2069_RS08320 (SGGBAA2069_c16130) - 1672765..1673262 (+) 498 WP_012962258.1 NAD(+) diphosphatase -
  SGGBAA2069_RS08325 (SGGBAA2069_c16140) - 1673314..1675080 (-) 1767 WP_012962259.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36497.48 Da        Isoelectric Point: 5.0313

>NTDB_id=40062 SGGBAA2069_RS08305 WP_009854678.1 1669742..1670743(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLTTRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=40062 SGGBAA2069_RS08305 WP_009854678.1 1669742..1670743(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTCCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATCCCTAATATTGCTAACAGCTATTTCTCA
ATTCTTGCTAAAGGAATTGATGATATTGCCGCTATGTACAAGTACAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAAGTTAACGTTGTCAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGACTACAAAGCAGCCGTTGCTGATGTTGTTGATATTTTGGCTAAAAACAATAAAGAAATCGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAATGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGATGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
GCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGATTGTTGAATGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATCACATCATACACACGTCCAAACCTTAGCTCAATCAGCCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTCGAAGAAAAAGAAATT
CTTCTTAACCACGGTCTTACAACACGTGGCACAACACGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A139R5I1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.48

100

0.805

  ccpA Streptococcus pneumoniae D39

78.378

100

0.784

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment