Detailed information NTG0397200

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: HRD51_RS15500
• Genome accession: NZ_CP054019
• Coordinates: 3465113..3466396 (-)
• Length: 427 a.a.
• NCBI ID: WP_016574019.1
• Uniprot ID: A0ABY8ACA0
• Organism: Streptomyces sp. A1-5
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3460113..3471396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRD51_RS15490 (HRD51_15250)	-	3461222..3463840 (-)	2619	WP_205364969.1	valine--tRNA ligase	-
HRD51_RS15495 (HRD51_15255)	-	3464011..3464976 (+)	966	WP_205364971.1	hypothetical protein	-
HRD51_RS15500 (HRD51_15260)	clpX	3465113..3466396 (-)	1284	WP_016574019.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
HRD51_RS15505 (HRD51_15265)	clpP	3466558..3467232 (-)	675	WP_073442521.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HRD51_RS15510 (HRD51_15270)	clpP	3467298..3467900 (-)	603	WP_205369925.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HRD51_RS15515 (HRD51_15275)	tig	3468200..3469597 (-)	1398	WP_235093334.1	trigger factor	-
HRD51_RS15530 (HRD51_15290)	-	3470700..3471080 (+)	381	WP_235093335.1	arsenate reductase family protein	-
HRD51_RS15535 (HRD51_15295)	-	3471121..3471315 (-)	195	WP_039636401.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46627.41 Da
• Isoelectric Point: 4.8160

>NTDB_id=397200 HRD51_RS15500 WP_016574019.1 3465113..3466396(-) (clpX) [Streptomyces sp. A1-5]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQEP
AKKALSVAVYNHYKRVQAGENGPGRGDEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIEARSGAKGIGFGATIRSKREIESKDQLQDVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQAVMYEIPSRKDVARVVITA
DVVHSNVNPTLVPRTRGDSGEPQEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=397200 HRD51_RS15500 WP_016574019.1 3465113..3466396(-) (clpX) [Streptomyces sp. A1-5]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCCGAGACCT
CCGAGGTGCGCTGGGAAGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCAACGGCTACGTCGTCGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCGGTGGCCGTGTACAACCACTACAAGCGCGTCCAGGCGGGCGAGAACGGCCCGGGCCGCGGCGA
CGAGGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCGCAGACCC
TCGCCCGGATGCTCAACGTCCCCTTCGCCTTTGCCGATGCCACGGCGCTGACCGAGGCCGGCTACGTCGGTGAGGACGTC
GAGAACATCCTCCTGAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGGGACGTCTCCGGCGAGGGCGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAATTCATCCAGATC
GACACCACCAACGTGCTGTTCATCGTCGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGGCCCGGTCCGGCGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCCAAGGACCAGCTCCAGGACGTGATGCCTGAGG
ACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCCTCACCTCGGTCCACAACCTCGACCGCGAG
GCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGACTCTTCGAACTCGACGGCGTGGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCCATTCTCCGCGGCACCGGCGCCCGCGGCCTGCGCG
CCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGATCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACCGCC
GACGTGGTCCACTCCAACGTCAACCCGACCCTCGTCCCCCGCACCCGCGGCGACTCGGGCGAACCCCAGGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.843	93.911	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.415	96.019	0.513