Detailed information NTG0396376

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: GDY38_RS09170
• Genome accession: NZ_CP045724
• Coordinates: 1986938..1988059 (+)
• Length: 373 a.a.
• NCBI ID: WP_015702596.1
• Uniprot ID: A0A9X3ZM42
• Organism: Pasteurella multocida strain PM22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1981938..1993059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GDY38_RS09150 (GDY38_09150)	napG	1984118..1984870 (+)	753	WP_015702595.1	ferredoxin-type protein NapG	-
GDY38_RS09155 (GDY38_09155)	napH	1984870..1985745 (+)	876	WP_005757794.1	quinol dehydrogenase ferredoxin subunit NapH	-
GDY38_RS09160 (GDY38_09160)	-	1985751..1986176 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
GDY38_RS09165 (GDY38_09165)	-	1986192..1986785 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
GDY38_RS09170 (GDY38_09170)	dprA	1986938..1988059 (+)	1122	WP_015702596.1	DNA-processing protein DprA	Machinery gene
GDY38_RS09175 (GDY38_09175)	lptD	1988165..1990513 (-)	2349	WP_016532717.1	LPS assembly protein LptD	-
GDY38_RS09180 (GDY38_09180)	-	1990577..1991128 (-)	552	WP_015702598.1	DNA-3-methyladenine glycosylase I	-
GDY38_RS09185 (GDY38_09185)	tal	1991286..1992239 (+)	954	WP_015702599.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41672.83 Da
• Isoelectric Point: 6.0366

>NTDB_id=396376 GDY38_RS09170 WP_015702596.1 1986938..1988059(+) (dprA) [Pasteurella multocida strain PM22]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHISPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEEAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASENSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=396376 GDY38_RS09170 WP_015702596.1 1986938..1988059(+) (dprA) [Pasteurella multocida strain PM22]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACATCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGAGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAATTATTTCGCCACTC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTAGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAAAACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	45.455	100	0.456
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394