Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GFH30_RS00825 | Genome accession | NZ_CP045650 |
| Coordinates | 186391..186969 (+) | Length | 192 a.a. |
| NCBI ID | WP_153370262.1 | Uniprot ID | A0A5Q0NYY3 |
| Organism | Acinetobacter wanghuae strain dk386 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 181391..191969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFH30_RS00810 (GFH30_00810) | - | 182879..183577 (+) | 699 | WP_153370258.1 | hypothetical protein | - |
| GFH30_RS00815 (GFH30_00815) | - | 183735..184815 (+) | 1081 | Protein_158 | DUF475 domain-containing protein | - |
| GFH30_RS00820 (GFH30_00820) | - | 184975..186339 (+) | 1365 | WP_153370260.1 | MFS transporter | - |
| GFH30_RS00825 (GFH30_00825) | ssb | 186391..186969 (+) | 579 | WP_153370262.1 | single-stranded DNA-binding protein | Machinery gene |
| GFH30_RS00830 (GFH30_00830) | ahpC | 187213..187776 (+) | 564 | WP_153370264.1 | alkyl hydroperoxide reductase subunit C | - |
| GFH30_RS00835 (GFH30_00835) | - | 187844..188767 (-) | 924 | WP_153370266.1 | LysR substrate-binding domain-containing protein | - |
| GFH30_RS00840 (GFH30_00840) | ycaC | 188919..189545 (-) | 627 | WP_153370268.1 | isochorismate family cysteine hydrolase YcaC | - |
| GFH30_RS00845 (GFH30_00845) | - | 189851..190729 (+) | 879 | WP_153370270.1 | pirin family protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 21183.92 Da Isoelectric Point: 6.4820
>NTDB_id=395897 GFH30_RS00825 WP_153370262.1 186391..186969(+) (ssb) [Acinetobacter wanghuae strain dk386]
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSNRQQGEQGDTGFNQPRFNNNQNNQGGYNNNANQGGYNNAPQQGGFNNAPA
NGYGNNNPSGFAPKAPAPTTAPAADLDDDLPF
MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSNRQQGEQGDTGFNQPRFNNNQNNQGGYNNNANQGGYNNAPQQGGFNNAPA
NGYGNNNPSGFAPKAPAPTTAPAADLDDDLPF
Nucleotide
Download Length: 579 bp
>NTDB_id=395897 GFH30_RS00825 WP_153370262.1 186391..186969(+) (ssb) [Acinetobacter wanghuae strain dk386]
ATGCGTGGTGTAAATAAAGTCATTTTAGTCGGTACTTTGGGTAAAGATCCAGAGACCAAAACGTTTGCCAATGGTGGATC
ACTCACTCAGTTTTCGATTGCAACCAGCGACTCATGGACAGATAAAAGTACCGGTGAGCGTAAAGAACAAACTGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGCGAAATTGCACAGCAATATTTGCGCAAAGGCTCAAAAGTATATATCGAAGGT
TCATTACGTACTCGTCAATGGACAGACCAAAATGGTCAAGAACGTTACACCACAGAAATTCGTGGTGAACAAATGCAAAT
GTTGGACTCAAACCGTCAACAAGGTGAGCAAGGCGATACTGGTTTTAATCAACCACGCTTTAACAATAACCAAAATAACC
AAGGTGGCTATAACAACAATGCTAACCAAGGTGGTTATAACAATGCACCGCAACAAGGTGGCTTTAATAATGCGCCTGCA
AATGGTTATGGCAACAATAACCCAAGCGGTTTTGCACCAAAAGCACCTGCGCCAACAACTGCACCTGCAGCAGATTTAGA
TGATGATCTTCCGTTTTAA
ATGCGTGGTGTAAATAAAGTCATTTTAGTCGGTACTTTGGGTAAAGATCCAGAGACCAAAACGTTTGCCAATGGTGGATC
ACTCACTCAGTTTTCGATTGCAACCAGCGACTCATGGACAGATAAAAGTACCGGTGAGCGTAAAGAACAAACTGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGCGAAATTGCACAGCAATATTTGCGCAAAGGCTCAAAAGTATATATCGAAGGT
TCATTACGTACTCGTCAATGGACAGACCAAAATGGTCAAGAACGTTACACCACAGAAATTCGTGGTGAACAAATGCAAAT
GTTGGACTCAAACCGTCAACAAGGTGAGCAAGGCGATACTGGTTTTAATCAACCACGCTTTAACAATAACCAAAATAACC
AAGGTGGCTATAACAACAATGCTAACCAAGGTGGTTATAACAATGCACCGCAACAAGGTGGCTTTAATAATGCGCCTGCA
AATGGTTATGGCAACAATAACCCAAGCGGTTTTGCACCAAAAGCACCTGCGCCAACAACTGCACCTGCAGCAGATTTAGA
TGATGATCTTCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.85 |
100 |
0.531 |
| ssb | Vibrio cholerae strain A1552 |
44.388 |
100 |
0.453 |
| ssb | Neisseria gonorrhoeae MS11 |
36.979 |
100 |
0.37 |
| ssb | Neisseria meningitidis MC58 |
36.458 |
100 |
0.365 |